| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3289 |
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| Symbol | |
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| ID | 5748874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3604948 |
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| End bp | 3607701 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298393 |
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| Product | hypothetical protein |
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| Protein accession | YP_001564312 |
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| Protein GI | 160898730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0563136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.27201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTACA GGTGTCTATG CAAAAATGCA AGCGTTCAAA GAAAGGCTGA TGTGAGAATT
TGTAGCACCA TTCTCGGCGT CGCCCTGTCC TCCATGGCCT GGAACGCGTC CGCATTGTCG
TTGGGCAGTC CTCGAGGCAA CGTGGTGCTG GGCGCTCCGT TCGACCTGGT GGTGGGCTTG
CAGCCCGATA GCGGCAACGA TGCCGGCAGC TCCTGCGTGC GCGCCGAGCT GCTGGCCGGT
GACAGGCCCA TCGAATCCTC GCGCGTCAGT GTCAGCCCGA CCTCGTCGGG CAAGGCCGTG
CGGGTGCAGG CCCGCTATAC GGTGGACGAG CCCATCGTGA CTCTCAAGCT GTGGGCGGGC
TGCGAAGGTG GCGGCATCAG CCGCAGCTAT ACGCTGCTGG CGCAGCTGCC CGAGTCGGTG
GATGCCACGG GCAATCAACC CATCAATGTG CGGGAGCTGG CGGCAGCCCA GCCGGCGCTG
GCGGCCGCTG GTGCCGCTGG TGCCGCTTCC GACCCATCTT CGACTTCTTC CTCCCGTCCG
GCCGCTGGCC GCAGCGCCCG GGCCGAGTCC AGGCCCGCAG CGGTGCCCGT TGCCAAGGAA
CCGAAACCCC AGCCCAAGCC AAAGCCCCAG GCCAAGCCCA AGGCGGCGGC CGAGAAATCC
AGGCCGCCCG TGGGCGTGAC CGCCCAGGCC CAGGCCGGGC AGTTGCAGGC GGGCCTGCGC
ATCGAACCGC GCCTGCGCAT GGAGCCGGTG GAGGAATGGC TGGGCACGGG CGGCACGCCG
GGCGCCGCTG GAGCAGCCGG AACACCCGGA ACACCCGAAG GCGGCGCCGC ATCTGCGGCT
CCCATGTTCG ATGCCGGCAG CGAGCAGCTG GCCGAGGCCA ACAAGCGCGT GCAGGCGCTG
GAGGCCGAGA TGGCGGCCTT CAAGAAGCGC GACGGCGTGG ACCGTGGACA ACTGGCCCAG
CTGCGGGCCG AGCTGGACGC AATGCGCCAG GAGTCCGGCG GCTCATCCTG GCTGTTCAAT
GCGCTGCTAC TGGCCCTGAT TGCCGCCGTG GCCGTGATCG GCTGGATGGC CTGGCGCATG
CGCTCGGGTG CTTTGCTGTT CTCGCGCGAG CCGGATGCCT GGCGGGAATC GGTGGAGCGT
TCGTCGCAGG ACCCCGTGCC GTCGACCCCG CCGCATGTGC GCGATGACGA GATTCACACC
CTGCCGCATT CCCTGGATCC CCATAGGCCC ACGCGGCCCA TGGCCCCCAG CCTGCGTGAG
CACCGGCCTG CGGCACCGCA GCAGGACGAC CGCCGGGGAC CGGATACCCT GGCTTCGCCC
TATGTGCAGC GCGGCGCCCA GATGCGCCCC GGCGTGACCT ATGAGCTGCA TGAGGATGTG
GACCCTGGCG ACTTCGGCCC GGCCACCATT CCCGTGCCTG TGTCCGTGCA TGCCGAACTG
GAAACCGAGC CTGCGCCGCA GGCCCCGGCA CCTGTGCGCA CGTCCGGGCC CGAGGCCATC
AAGGCCAGGC GCATGGTGCA GCCCGGCGAA CTGTTCGACG TGCAGCAACA GGCGGAATTC
TTCATCTCTG TGGGCGAGCA CCAGCAGGCC ATCGAGCTGC TGCGCTCGCA TATCGACACG
CATGAGGATT CCTCGCCGCT GGCCTATCTG GAGCTGCTGC ACCTGTACTA CACGTTGAGC
CGCCGCGACG ATTTCGACCA GCTGCGCGCG CGTTTTGCCA GGCATTTCAA CGCCCGCGTG
CCGGCCATGC CGGGCTTTAC CGACAAGGGC AGCAGCCTGC TGCAGGGCTA TCCCGAGCAA
CTGGCACGCA TCGAGGCCCT GTGGCCCGTG GACGAAGTCG AAGCTTGCCT GGCGCACTAC
CTGTTCAAGC AGGACGGCGC ACCCGACCCC GATGCGCCGG CCCCTTTCGA CCTGGCCGCC
TTCGACGACC TGCTGCTGCT GCTGTCCATT GCGCGCACTT CACCTGCCGG AACACGCGGC
GAACCCGGCC CGCGCGAGCG CACCACGCCG CGCATGGTGG CAGGCACGGC CGTAGCCGGC
GCAGCCACGG CTGGCGCTGC TGCCTTCACA GCGGCGGCAG AAGCCACGCC GGCGCAGGCT
CCTGCATCCG CGGCCACGGG CGTGGACTGG ATGGCAGAGC TGCAGCCGCC GATAGAACCT
GCACAGCCGC AGCCGGCCTC GGTGACGCCG CTGGAGCCGG GCCTGGAGTT CACCCCCATG
GACACGCTGC CCCTGTCCAC GGGTGCTGTC GGTGGCGGCC ACAGGCCTGC GAGCAGCGCA
CCGGACTCGT TGTCCGCACC GCTGCACTTC GAGCTGCAGC CCCTGAACTT CGATCTGGAT
CAGGCCGGCC AGCTGCCCGC AGGCCAGGTG CGCGCCGTGC CCCTGGGCGA GGCGCCTTCC
TTCATCCACG ATGAGTCGGC ACCGCTGCTG GACATAGACC TCACGGACCT GGGCGAGAAC
GAGCTGCCGC ATGTCGATGT GCCCTCGCGC TTTCCGCCCG TGACGCTGTC GGTGCCCGGC
TCGGGTGCCG TGGGTTTCAG CAGCCACAAT CTCAAGGCGC CGCTGGACAT GGACCTGGCG
CTGGACAAGT GGGAGCTGGA GCCGCCCGAC ACCGTGCGTG AGCACCGTGG CCTGGACGAG
CCGCTGAGCC GCTCGGTGGA CATGCTGCTG TCGCGTGAGA CCGACCCGGC CTTTCGTCGA
TCACCACAGC CTGCGTCGCC GCAGGCAGAC GACAAGGATC CGCCCAAGGG CTGA
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| Protein sequence | MSYRCLCKNA SVQRKADVRI CSTILGVALS SMAWNASALS LGSPRGNVVL GAPFDLVVGL
QPDSGNDAGS SCVRAELLAG DRPIESSRVS VSPTSSGKAV RVQARYTVDE PIVTLKLWAG
CEGGGISRSY TLLAQLPESV DATGNQPINV RELAAAQPAL AAAGAAGAAS DPSSTSSSRP
AAGRSARAES RPAAVPVAKE PKPQPKPKPQ AKPKAAAEKS RPPVGVTAQA QAGQLQAGLR
IEPRLRMEPV EEWLGTGGTP GAAGAAGTPG TPEGGAASAA PMFDAGSEQL AEANKRVQAL
EAEMAAFKKR DGVDRGQLAQ LRAELDAMRQ ESGGSSWLFN ALLLALIAAV AVIGWMAWRM
RSGALLFSRE PDAWRESVER SSQDPVPSTP PHVRDDEIHT LPHSLDPHRP TRPMAPSLRE
HRPAAPQQDD RRGPDTLASP YVQRGAQMRP GVTYELHEDV DPGDFGPATI PVPVSVHAEL
ETEPAPQAPA PVRTSGPEAI KARRMVQPGE LFDVQQQAEF FISVGEHQQA IELLRSHIDT
HEDSSPLAYL ELLHLYYTLS RRDDFDQLRA RFARHFNARV PAMPGFTDKG SSLLQGYPEQ
LARIEALWPV DEVEACLAHY LFKQDGAPDP DAPAPFDLAA FDDLLLLLSI ARTSPAGTRG
EPGPRERTTP RMVAGTAVAG AATAGAAAFT AAAEATPAQA PASAATGVDW MAELQPPIEP
AQPQPASVTP LEPGLEFTPM DTLPLSTGAV GGGHRPASSA PDSLSAPLHF ELQPLNFDLD
QAGQLPAGQV RAVPLGEAPS FIHDESAPLL DIDLTDLGEN ELPHVDVPSR FPPVTLSVPG
SGAVGFSSHN LKAPLDMDLA LDKWELEPPD TVREHRGLDE PLSRSVDMLL SRETDPAFRR
SPQPASPQAD DKDPPKG
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