| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3288 |
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| Symbol | |
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| ID | 5748873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3603402 |
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| End bp | 3604895 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298392 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001564311 |
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| Protein GI | 160898729 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.636497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAGGCG CAGGCATCAT GGGGCAAGGC ATTGCCCAGT TGGCCGCCCA GGCAGGCGCC
AGGGTGCTGT TGCAGGATGC CCGTCCCGGT GCTGCCGCAC AAGCGCAACA ACAGCTGCTT
GGGCTGTGGG ACACGCTGCA AAAGAAACAA AAAATAACAA GTGAGCAGGC CGCAGATTGC
AAGGCCCGGC TGACGGTAGT GGACGGTCTC GATGCCTTCA AGAACTGCGA CCTGGTGATA
GAGGCCATCG TCGAGCGCAT GGATGCCAAG CAGGCGCTGC TGCGCGAGCT GGAGGCCATC
GTTGCGCCCG GGACCCTCAT CGCCAGCAAT ACCTCGGCCC TGTCCATCAC CACGCTGGCC
ACGGCGCTCA AGCACCCGCA GCGCTTTGCC GGCTTTCACT TCTTCAACCC GGCACCGCTG
ATGAAGGTGG TGGAGATCGT GCGCGGCCTG GCCACGGACG AGGCCACCTG CGCCACGCTG
GCACAGTTCG CGCGCAGCTT CGGCCACACG CCCGTGCGGG CGCAGGACAC GCCGGGCTTT
CTGGTCAACC ACCTGGGCCG CGGCTATGTG ACCGAGGCGC TGCGCATCGT GCAGGAAGGC
ATTGCCGACT TCGCCACCAT CGACCGCATC CTGCGCGAGC AGGTGGGATT CAAGCTCGGC
CCGTTCGAGC TGATGGATCT CACCGGCCTG GATGTCACCC ATGCCGTGAT GGAGCACATC
TACCACCAGT ACTACCAGGA GCCGCGCTAC CGCCCCAGCC CCATTGCCGC GCAGCGCGTG
GCGGCCGGCC TGCTGGGCCG CAAGACCGGC CGGGGCTTTT ACCGCTATGC CGAAGGCCGC
GCCGAGCAGC CTGCCGAGCC TGCCGTGCCG CAGGTGCAGA CGCTGCCACC GGTCTGGGTG
TCCGCACGCG CGGCCCGGCG CAACGAGATC TACCAGTTGC TCAAGAGCCT GGGCGCGCGC
ATTGAAACCG CGCAGGCACC GACCGAGCAG GCCTTGATCC TGGTGGCGCC GCTGGGCCTG
GACGTGACCA CGGTGGCTGC CGTGGAGCGG CTGGACTGCA CGCGCACCAT GGGCATCGAC
ATGCTGATCG CCGACGCCGA CACGCGCCGC CGCGTACTGG CCACCACGCC GGCCACGCGC
ACCGACATGC GCGATGCGGC CCATGCGCTC TTTGCCAGCG ATGGCAAGGC CGTCAGTGTG
ATCCGCGACA GCGGCGGCTT CGTCACCCAG CGCGTGGTGG GCTCCATCGT CAACATCGCC
AGCGACATCT GCCAGCAGGG CATCGGCAGC CCGGCCGACC TGGAAAAGGC CGTGACCCTG
GGCCTGGGCT ATCCCATGGG CCCGCTGGCC ATGGGCGACC GCTGGGGCCC CACCAACATG
CTGGAGGTCC TGTTCAACCT GCAGACCGTC TACGGCGACC CGCGCTACCG CCCCAGCCCC
TGGCTGCGCC GCCGTGGAGC GCTGGGGCTG AGCCTCACGC ACGAGGAGCC ATAA
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| Protein sequence | MIGAGIMGQG IAQLAAQAGA RVLLQDARPG AAAQAQQQLL GLWDTLQKKQ KITSEQAADC
KARLTVVDGL DAFKNCDLVI EAIVERMDAK QALLRELEAI VAPGTLIASN TSALSITTLA
TALKHPQRFA GFHFFNPAPL MKVVEIVRGL ATDEATCATL AQFARSFGHT PVRAQDTPGF
LVNHLGRGYV TEALRIVQEG IADFATIDRI LREQVGFKLG PFELMDLTGL DVTHAVMEHI
YHQYYQEPRY RPSPIAAQRV AAGLLGRKTG RGFYRYAEGR AEQPAEPAVP QVQTLPPVWV
SARAARRNEI YQLLKSLGAR IETAQAPTEQ ALILVAPLGL DVTTVAAVER LDCTRTMGID
MLIADADTRR RVLATTPATR TDMRDAAHAL FASDGKAVSV IRDSGGFVTQ RVVGSIVNIA
SDICQQGIGS PADLEKAVTL GLGYPMGPLA MGDRWGPTNM LEVLFNLQTV YGDPRYRPSP
WLRRRGALGL SLTHEEP
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