Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3280 |
Symbol | |
ID | 5748865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3593026 |
End bp | 3594741 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298384 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001564303 |
Protein GI | 160898721 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.442593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.404376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGG CGCAGATCGG CAAGGTCCCC GGCAGCGGCG CTGCCACGGG CGGTTTCCGC CAGGCCCAGG CCTGGCTGCA TACCTGGTGC GGGCTGTGGT TTTCGTGGCT GCTGTTCGCG GTGTTCCTCA CGGGTTCGCT GGCCGTGTTC CAGGAAGCCA TCACGCACTG GATGACGCCC GAGCACCATG CCGAGGAGGC GGCCGAGGCG GCAGCGCGCG CCGCCGCGCC GGCCGGGCAG GGTGCGGACC TGGGCCAGCG CCTGGCCTGG GGCGCGGCCT ACATGCAAAA GCACCACCAG GGCGCGCAGA TGTGGGAGAT CTGGCCGTCC GACGACAAGG GCGGCGGCGA CCTGCATGTC TACTGGTTCG ACGCCAGGCG CGAATACGCC GATGCCGAGC TGGACACCGC CACGGGCGAG GAAATGGGGG CCGGCCACGG CCACGGCGCC GCGCGCGCCA CCATGGGCGG CAACCATTTC GTGGATTTCC ACTATGAACT GCATGCAGGG CAGGTAGGAC TGTGGGTGAT CGGCATTGCC GCCATGGCCA TGCTGGTGGC ACTGGTCAGC GGCGTGATCA CGCACAAGCG CATCTTCAAG GACTTCTTCA CCCTTCGCGC ACGCAAGGGC CAGCGCAGCT GGCTGGACGC GCACAACGCC GTGGCGGTGC TGACGCTGCC CTTCCAGTTC ATGATTGCCT ATACCGGCAT CGCCATCTCC AGCCTGAGCT TCATGCCCGT TGGCGTCTGG ACGGTCTATG GCACGGACCA GGCCGCCCGC ACGGCCTTCA TCGCCGACAT GACCGAGGCC GGGCCGCCCG CGCCTTCCGG CAAGCCCATG GCCGTGCCGG ATCTGGAGTC GTTTGCGCGG CGCGGCCAGG AGCTGATGGG CCAGGCGGTG CGCGCGGTGG TCGTCAACCA TCCCGGCGAT GCGTCGGCAC GCATCGGCGT CTACGGCTGG AACAGCGATG ACCGTGCGCA TCAGCGCCTG AGCCCCAATT CGGGCATGGC CATGTTCTCG GCCGCCACGG GCGAGGTGCT GCAGGTGCGC CTGCCCGGCG GCGCCGACGG CGGCACCCCC TCGCTGGCCC AGGCGGTCAT GGGCGGGCTG CACATGGTCA AGTTCGGCGG GCTGGCCATG AAGTGGCTGT ACTTCCTGTG CGGCCTGGCG GGCGCGGCCA TGATGGCCAC GGGCGCCATT CTCTTCATGG TCAAGCGCCG CAGCCGCCAC CAGGGCGAGT TCGGCAGCGC CACGGCGCGC GTGTACCGGC TGGTCGAGGG CCTGAACGTG GCGGCCATCG CCGGGCTGGG CCTGGGCTGC ATCGGCTACC TGTGGGCCAA CCGCCTGGTG CCCGTGGGCC TGGCGCACCG TGATGACTGG GAGCTGGCCG TGTTCTTCGG GCTGTGGGGC CTGGCGCTGG TGCATGCGTT GGCCTGCGCG CCGGCCACGG CCTGGCGCCA GCAGATGGGC CTGCTGGCCA TGCTGTGCCT GCTGCTGCCG CTGCTCAACT GGATCACCGT GGGCGAGCCG CTGTCGGCCC ACATGCTGGA GGGCGACTGG GAAAGCGCCG GGGTGGAGCT GTTCTGCCTG GCCACGGGGC TGGCGGCCGC CTGGGCCTGG CGCTGGCTGG CGCGGCGCGG CGCGGGTGCC GCCGCCAAGG CAAGGACGGC CAAAGGCCAG ACCGCCGTGG CCGGCCCCTC GGAGGTGCAG GCATGA
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Protein sequence | MAKAQIGKVP GSGAATGGFR QAQAWLHTWC GLWFSWLLFA VFLTGSLAVF QEAITHWMTP EHHAEEAAEA AARAAAPAGQ GADLGQRLAW GAAYMQKHHQ GAQMWEIWPS DDKGGGDLHV YWFDARREYA DAELDTATGE EMGAGHGHGA ARATMGGNHF VDFHYELHAG QVGLWVIGIA AMAMLVALVS GVITHKRIFK DFFTLRARKG QRSWLDAHNA VAVLTLPFQF MIAYTGIAIS SLSFMPVGVW TVYGTDQAAR TAFIADMTEA GPPAPSGKPM AVPDLESFAR RGQELMGQAV RAVVVNHPGD ASARIGVYGW NSDDRAHQRL SPNSGMAMFS AATGEVLQVR LPGGADGGTP SLAQAVMGGL HMVKFGGLAM KWLYFLCGLA GAAMMATGAI LFMVKRRSRH QGEFGSATAR VYRLVEGLNV AAIAGLGLGC IGYLWANRLV PVGLAHRDDW ELAVFFGLWG LALVHALACA PATAWRQQMG LLAMLCLLLP LLNWITVGEP LSAHMLEGDW ESAGVELFCL ATGLAAAWAW RWLARRGAGA AAKARTAKGQ TAVAGPSEVQ A
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