| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3276 |
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| Symbol | |
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| ID | 5748861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3588693 |
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| End bp | 3591215 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298380 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564299 |
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| Protein GI | 160898717 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.130164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCTC AGACCATGCG CCAGAACTCC ATGCGGCAGA CTGCCGCCTC CACCGTCCGC
CCATCCCAGG CGGCCCCGGC GTTACGTCCG GTGGCGCTGG CGCTGCAGGT GCTGTGCGCG
GGCACGCTGG CGGGGCTGGC TGCCGCAGGC GCCCTGGCTC CGGCACAGGC CTGGGCGCAG
CCCGCTGCCG GTGCTTCGCA GCAACGCCAG TACAGCATTG CGGCCGGCCC GCTGGAAAGC
GTGCTCAACC AGCTCGGCCG CGAGGCCGGC GTGCTGGTCA CCTTCGGCTC GGCCGTCACC
GAAGGCTTGC GCAGCGGCGG CGTGAGCGGG CGCTTCACCG TGGAGCAGGC GCTGGACCGC
GCCTTGCTGG GCACGCCGCT GGCGGCCGTG CGCTCGGCCG GTGGCGGCTA CACCCTGCGC
GAGATGCCCG TGGTGCCGGC CGCCTCCGCT GCGGGTGCGG CAGGCGCGCC GTCCTCCCAG
ACACTCAGGA CCGTGCTGGT CACGGCCTCG GCCCAGGCCA GCCCCACCAC CGAAGGCTCG
GGCTCCTACA CCACGCCGGC CACGGCGGCA GCCACGGGCC TGAGCCTGTC GCTGCGCGAC
ACGCCGCAGT CCGTCAGCGT GCTCACGCGC CAGCAGATCG AGGACCAGGG CCTGCTCTCG
CTCAACGACG CCATGCGCAG CGTCACCGGC ATCCATGTCG TCAGCTCGGA CAGCGACCGC
TCGGACTTCT ACTCGCGCGG CTTCTACGTG GACAACCTGC AGTACGACGG CGTGCCCACC
TCCATCGGCC TGTCGTTCTA CGGGGACTCG GGCACCGATA CCACCATCTA TGACCGCGTC
GAAGTGGTGC GCGGCGCCAC GGGCCTGCTC ACGGGCGCGG GCAATCCGTC GGCCTCCATC
AACATGGTGC GCAAGCACGC CAACAGCAAG GTGTTCACGG GCTCGGCCTC GGCCAGCGTG
GGCTCGTGGA ACCACCATCG CGGCACGGTG GACCTGTCCA TGCCGCTGAC GCAGGACGGC
CGCATCCGCG CACGCGTCGC AGGCATGGCC GAAGAGCGCG ACTCCCATGT GGACCTCTAC
CACGCGCGCA AGCAGGTCTT CTACGGCGTG ATCGATGCCG ACCTCACGCC CGACACCACG
CTCAGCGTGG GCGCCGACTA CCAGGCCAAC CGGCCCACCG GCTCGACCTG GGGCGGCCTG
CCGCTGGTCT TCACGAACGG CATGCCAGCC GACTGGAGCA CCTCCAAGAC CACGGCCGCG
AACTGGACGC GCTGGAACAG CACCAACAAA AACATCTTCG CCAACCTGCA GCACCGTTTC
GGCAACGACT GGAAGCTCAA GGCCAACTTC GTGCACCGCG ACAGCGCCTA CGACGCCAAG
CTGCTGTACC TCATGCGCCA GCCCGACATC ACCACCGGCC TGGGCATGGC AGCCCTGCCC
AACTACTCCG AATACAGCTT CCAGCAAAAC AGCGCCGACC TGCAGGTGAC GGGCGGCTGG
GAACTGGGCG GGCGCCGCCA TGAAGCCGTT GTCGGCCTGA CCAGCAGCCG CGCCCGCGAG
CACAAGGCCG GCCATGCGCG CACCAGCCCG CTGCAGGACG TGGGCAACTA CTACCAATGG
GACGGCTCCT ATGCCGAGCC CACCTGGGGG CCGCTGACCA CCAGCAGCCT GGACCACACG
CGCCAGGACG CGCTGTACGG CGCGCTGCGC CTGTCGCTGG CCGATCCGGT CAAGCTCATC
GTGGGCGGGC GCCAGAGCAG CTGGAAGGTG CGCAGCCTGA GCGAGAACCG CTCGCACGAT
GTCTTCATCC CCTATGCCGG CGTCGTACTG GACCTGAGCG AAGGCTTCTC GGCCTATGCC
AGCTACACCG ACATCTTCCA GCCCCAGAAC TACCGCGACC GTGGCGGCAG CTACCTGGAC
CCCGTGGCGG GCAAGAGCTT CGAGATCGGC ATCAAGGGCG AGCACCTGGA CGGCAGGCTC
AACAGCTCGC TGTCCGTCTT CCGCATCCAG CAGGACAACG TGGCCCAGCT GGACGAAGGC
CAGGTCGCGC CCGGCACCAC CGACTTCGCC TACTACGGCG CCAAGGGCGT GACCAGCAAG
GGCTTCGAGG CCCAGGTCTC GGGCGAGCTG GCCACGGGCT GGAACCTGTC GGCCGGCATT
GCCCACACCG TCGCGCGTGA CGCCCAGGGC CTGTCCATCA ACGCCTGGGC GCCCAAGACC
CAGGCCCAGC TGTTCACTTC CTACCGCCTG CCCGCTGGAT GGAATCAGCT CACCGTGGGC
GGCGGCCTGC AATGGCAAAG CCGCACCCGC GCCAGCGTCT TCGTGGCGGG CAATGACCTG
GTCTTCGAGC AGAAATCCTT CGCCACCGCC AGCCTCATGG CGCGCTATGC CTTCAGCCCC
AGGCTCTCGC TGCAGCTGAA CCTGAACAAC CTCTTCAACA AGAAGTACTA CGTCAACATC
GACGGCCAGG GCCAGTTCGG CACGCCGCGC CAGGCCATGG CGGTGCTGAA CTACAAGTGG
TGA
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| Protein sequence | MRPQTMRQNS MRQTAASTVR PSQAAPALRP VALALQVLCA GTLAGLAAAG ALAPAQAWAQ
PAAGASQQRQ YSIAAGPLES VLNQLGREAG VLVTFGSAVT EGLRSGGVSG RFTVEQALDR
ALLGTPLAAV RSAGGGYTLR EMPVVPAASA AGAAGAPSSQ TLRTVLVTAS AQASPTTEGS
GSYTTPATAA ATGLSLSLRD TPQSVSVLTR QQIEDQGLLS LNDAMRSVTG IHVVSSDSDR
SDFYSRGFYV DNLQYDGVPT SIGLSFYGDS GTDTTIYDRV EVVRGATGLL TGAGNPSASI
NMVRKHANSK VFTGSASASV GSWNHHRGTV DLSMPLTQDG RIRARVAGMA EERDSHVDLY
HARKQVFYGV IDADLTPDTT LSVGADYQAN RPTGSTWGGL PLVFTNGMPA DWSTSKTTAA
NWTRWNSTNK NIFANLQHRF GNDWKLKANF VHRDSAYDAK LLYLMRQPDI TTGLGMAALP
NYSEYSFQQN SADLQVTGGW ELGGRRHEAV VGLTSSRARE HKAGHARTSP LQDVGNYYQW
DGSYAEPTWG PLTTSSLDHT RQDALYGALR LSLADPVKLI VGGRQSSWKV RSLSENRSHD
VFIPYAGVVL DLSEGFSAYA SYTDIFQPQN YRDRGGSYLD PVAGKSFEIG IKGEHLDGRL
NSSLSVFRIQ QDNVAQLDEG QVAPGTTDFA YYGAKGVTSK GFEAQVSGEL ATGWNLSAGI
AHTVARDAQG LSINAWAPKT QAQLFTSYRL PAGWNQLTVG GGLQWQSRTR ASVFVAGNDL
VFEQKSFATA SLMARYAFSP RLSLQLNLNN LFNKKYYVNI DGQGQFGTPR QAMAVLNYKW
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