Gene Daci_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3275 
Symbol 
ID5748860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3587568 
End bp3588551 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content73% 
IMG OID641298379 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_001564298 
Protein GI160898716 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0559044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGT TCCCTTCCAC TTCTTCCCCC ATTTCTGCCG AAGTGGCCCG CCAGGCCGTG 
CAATGGTGGC TGCAACTGAA CTCCGGCAAG GCCCAGGCCC GGCAGCACGA TGGCCTGCAG
CGCTGGCGTG CGGCCAGCCC CGAGCATGAG GCCGCCTGGC AGCGCATCGA ATCCATGGGC
AGCCAGATGG CCGGCATTCC CATGCCGCTG GCGCGGGCCG CATTGGCCGC ACCCGGCTCG
GCCGGCAGGC GCCGTGCGGT GCAGGCGCTG GCCGTGCTGC TGGTCTCGGG CGCAGGCTCC
GCAGCCGTCG TGCGCTCGCA GGCCTGGCGC GGCTGGACGG CCGACCAGGT GGCTGCCGTA
GGCGAGCAGC GCACGCTGCC GCTGCCCGAC GGCGGCAGCG TGGTGCTCAA CACCGGCAGC
GCCCTCAACC TGCGCTACGG CGCGGCCGAG CGCGTGCTGG AGCTGGTGCG TGGCGAAATC
CTCGTGCAGA CTGCGCCGGA CAGCCTGCAC CGTCCCTTCA TCGTGCAGAC CGCCATGGGC
GCCGTTCAGG CCCTGGGCAC GCGCTTCACG GTGCGCCAGC GCGAGTCCGC CGTTGAAGTG
GGCGTGCTGC AAGGCGCCGT GCAACTGCGG CCCGCGCATG CCCCGCATGC CCCGCAGCGC
ATAGCTGCGG GAGAGCAGGG CACGTTCACG GCCCAGCAGG CCGTGCACTC CGGCGCGCTG
GACACGGCGG CCAGCGCCTG GGCCGAAGGC ATGCTGGTGG CCTCGCGCAT GCGGCTGGAG
GATTTCCTGG TCGAGCTGGG CCGCTACCGG CGCGGGCGCC TGGGCTGCGA CCCGGCCGTG
GCCGGCCTGC ACGTCTCCGG CGCCTATCCG CTGGCCGACA CCGACCGCGT GCTGGCCGCG
CTGACTTCCT CGCTGCCCGT GGAAATCCAC TCCTTCTCGC GCTACTGGGT GATGGTGCGG
CCTGCCGGGG CGGGCAAGGC ATGA
 
Protein sequence
MQAFPSTSSP ISAEVARQAV QWWLQLNSGK AQARQHDGLQ RWRAASPEHE AAWQRIESMG 
SQMAGIPMPL ARAALAAPGS AGRRRAVQAL AVLLVSGAGS AAVVRSQAWR GWTADQVAAV
GEQRTLPLPD GGSVVLNTGS ALNLRYGAAE RVLELVRGEI LVQTAPDSLH RPFIVQTAMG
AVQALGTRFT VRQRESAVEV GVLQGAVQLR PAHAPHAPQR IAAGEQGTFT AQQAVHSGAL
DTAASAWAEG MLVASRMRLE DFLVELGRYR RGRLGCDPAV AGLHVSGAYP LADTDRVLAA
LTSSLPVEIH SFSRYWVMVR PAGAGKA