| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3273 |
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| Symbol | |
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| ID | 5748858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3584473 |
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| End bp | 3586953 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298377 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001564296 |
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| Protein GI | 160898714 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.480033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0611881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG TACCCATGCC GCATCCCGTC TTCCACCCCC TGGCGCATGC CGCCCGACTG
GCCCTGCTGG GCATGGCATT GGCCGCAGGC GCCGTGCAGG CGGCCGAACC GGCACCTGCT
CCCACACCCG CTCCCGCAGC CCAGACCTAC CAGATCGCGC CCGGGCCGCT GGGCCGCACG
CTGGCCGGCG TGGCCACGGC GGCGGGCATT TCGCTGTCCT TCGATCCTGC GCTGACCGAA
GGGCTCACCA GCCCGGCCCT GTCCGGCCAC TACGCGCCGC AGCAGGCGCT GCAGCGCCTG
CTGGCCGGCA GCGGGCTGGA CATGGTGGCG CGCAGCGATG GCAGCTACAC GCTGCGCAGG
CAGGCCGCAC CGGCCGGCGC TGCTGCCGGC TCCACCACGG TCCTGAACGA AGTGCAGGTG
ACGGCCCGCG CCGAGCGCAG CGCCACCAGC GAAGGCACGG GCAGCTACGC GGCCCGCGCG
GTCACGGTGG GCAAGGGCGA GCAGGCGATC AAGGACATCC CCCAGTCCAT CAGCGTGATC
ACGCGCCAGC GCATGGACGA CCAGAACCTC AACACCGTGG ACGACGTGCT GGCCAGCACC
ACGGGCATCA CCATGTACGA CAGCCCCATG GGCGGGCGCT ATGTCTACTC GCGCGGCTTC
CGCGTGGATA CCTACCAGTT CGATGGCGTG AACCGCGCCT TCTACTACCC GCAGGCCGAC
AACTTCACCA GCAACGCCGC CACGCTGGAC CGCGTGGAAG TGGTGCGCGG TGCCACGGGG
CTGCTGCAGG GGGCGGGCTC GCCCAGCGCG GCCATCAACA TGGTGCGCAA GCGCCCCCTG
GCAGAGCGCC AGCTGGAGGT ATCGGCCAGT GTGGGCTCCT GGAACAACCT GCGTAGCGAG
ATCGATGCCA CTGGCCCGCT CAACGAGGCC GGCACGCTGC GCGGGCGCGT GGTCGCCAGC
CTCAACAGCC GCGACTATTT CTACGACGTG GCCAGCAGCC GCACCGGCGT GCTCTACGGC
GTGCTGGAGT ACGACCTCAG CTCCCAGACC CGGCTGACGG TGGGCGCCAC CCACGAGCGG
CTGCGCTCCA CGCCGTTCTT CCAGGGCCTG CCGCGCTATG CCGACGGTGC GGACCTGCGG
CTGCCGCGCT CCACCTTCCT GGGCGCGGAC TGGAACCGCT GGGACAGCGA GCAGACATCG
CTGTTTGCCG AGCTGCAGCA CCGCTTCAAC GCGGACTGGA CCGTCAAGGC CACGGCGGGC
TACACCCGGG AAAAGCACGA CATGAAGTAC GCCTTCGCCC TGGGGGCGAT CAATCCCGCC
ACGCTGGCGG GCAACGAGAT GTATGCCGGC CTGTTTGATG TCACCACCGA CAACAAGACC
CTGGACGTGG CGGTGGACGG CAAATTCGAC GCCTTCGGCC GCCGGCATTC GCTGAGCTTT
GGCGCCAACA CGGGCCGCAT GGTCAACGAC AGCGACTATT CGCTGATCCG CATGGGCTTG
CCCAACAACG TGTTCGACCC GAGCGCCGCC ATCCGCGAGC CGTCCCGCGC GGAATTCCTG
GCCAACCGCT ATCGCGGCGA TGAAAGCCGC ACCCGCATGA CCCAGTCCGG CGCCTATGGC
GTGGCGCGGC TGGGCCTCAC CGATGCGCTG ACCCTGATCG GCGGCGCCCG CGTCACCCGC
TTCACGGGCA GCAGCAACTA CCGCAACACG GGCGAGGCCT ACAACGACCC GTACAAGGAA
AGCGGCGTCA TCACGCCCTA TGGCGGCCTG GTCTATGCGC TCAATGACCA GTGGTCGGCC
TATGCCAGCT ACTCCGACAT CTTCCAGGCC CAGAACGCCG TGACGGCGGC CGGCGACCTG
CTGGCACCCA TCAAGGGGCG CAATCTGGAA GTGGGCATGA AGGGCGAATT GCTGGACGGC
AGGGTGAACG CGGCCGTGGC CCTGTTCCGC ATCGACCAGA AGAACCGCGC CGAAGAGGAC
CTGGTCAACC CCTGCTCGGC CAGCACCTAC TGCTATGTCT CCGTGGGCAA GGTCCGCAGC
CAGGGGCTGG ATGCCGAGAT CAGCGGCGAG GTGGCGCGTG GCTGGCAGCT GTTTGCCGGC
TACACCTTCA GCCATTTCAA GTACCTGGAC AACACCTCCA ATGCCGGCGT GGAGTTCGCC
AGCACCTACA CGCCCAAGCA CATGCTGCGT GTCTGGAGCG ACTACCGCCT GCCGGGCGAA
TGGAGCGCCT GGAACGTGGG CGGCGGCGTC AACTTCCAGA CCGCCAGCTC GCGCGCGGTG
GGCGCCATCA CCGACGTGCA GCCAGCCTAT GCCGTGTGGT CTGCCCGTCT GGGCTACCGC
ATCGACCGCA ACTGGTCCGT GGCACTGAGC GTGGCCAACC TGTTCGACAA GACCTACTAC
CAGACCATCG GCGCGCCGGC CTGGGGCAAT GTCTACGGCG CACCGCGCAG CGCGACGCTC
ACCCTGCGCG GCAAGTTCTG A
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| Protein sequence | MPAVPMPHPV FHPLAHAARL ALLGMALAAG AVQAAEPAPA PTPAPAAQTY QIAPGPLGRT
LAGVATAAGI SLSFDPALTE GLTSPALSGH YAPQQALQRL LAGSGLDMVA RSDGSYTLRR
QAAPAGAAAG STTVLNEVQV TARAERSATS EGTGSYAARA VTVGKGEQAI KDIPQSISVI
TRQRMDDQNL NTVDDVLAST TGITMYDSPM GGRYVYSRGF RVDTYQFDGV NRAFYYPQAD
NFTSNAATLD RVEVVRGATG LLQGAGSPSA AINMVRKRPL AERQLEVSAS VGSWNNLRSE
IDATGPLNEA GTLRGRVVAS LNSRDYFYDV ASSRTGVLYG VLEYDLSSQT RLTVGATHER
LRSTPFFQGL PRYADGADLR LPRSTFLGAD WNRWDSEQTS LFAELQHRFN ADWTVKATAG
YTREKHDMKY AFALGAINPA TLAGNEMYAG LFDVTTDNKT LDVAVDGKFD AFGRRHSLSF
GANTGRMVND SDYSLIRMGL PNNVFDPSAA IREPSRAEFL ANRYRGDESR TRMTQSGAYG
VARLGLTDAL TLIGGARVTR FTGSSNYRNT GEAYNDPYKE SGVITPYGGL VYALNDQWSA
YASYSDIFQA QNAVTAAGDL LAPIKGRNLE VGMKGELLDG RVNAAVALFR IDQKNRAEED
LVNPCSASTY CYVSVGKVRS QGLDAEISGE VARGWQLFAG YTFSHFKYLD NTSNAGVEFA
STYTPKHMLR VWSDYRLPGE WSAWNVGGGV NFQTASSRAV GAITDVQPAY AVWSARLGYR
IDRNWSVALS VANLFDKTYY QTIGAPAWGN VYGAPRSATL TLRGKF
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