| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3271 |
|---|
| Symbol | |
|---|
| ID | 5748856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3582894 |
|---|
| End bp | 3583400 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298375 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001564294 |
|---|
| Protein GI | 160898712 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.24577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.0205939 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCCG CCTCCACCCC CCAGCACCGA GAAGCCGCCT CCCTGTACAC CGCCCACCAT
GGCTGGCTGC AGGGCTGGCT GCGCCGCAGG CTGGGCAACG GGGCGGACGC GGCGGACCTG
GCGCAGGACA CCTTCGTGCG CATCCTGGGC GTGCGCGACC TGGCCGGTGT GCAGGAGCCG
CGTGCCTACC TGACCACGGT GGCCAAGGGC GTGCTCGTCA ACTGGTACAA GCGCCAGGCG
CTGGAGCGGG CCTACCTCGA AGCCCTGGCC GCACTGCCCG AGCCTGTGGC GCCTTCGCCC
GAGCAGCGCG CCCTGGTACT GGAGACCCTG CACGAGATAG ACGCCATGCT GGACGCGCTG
CCGCCCATCG TGCGGCGCAC GTTTTTGCTG TCCCAGCTGG ATGGCATGAA GTACGAGGAC
ATCGCGCAGC AGCTGGAGGT CTCGCTCACC AGCGTCAAGC GCTACATGGC CCAGGCGTTT
CGCCAATGCC TGGTGGCAAT GGCGTGA
|
|---|
| Protein sequence | MPSASTPQHR EAASLYTAHH GWLQGWLRRR LGNGADAADL AQDTFVRILG VRDLAGVQEP
RAYLTTVAKG VLVNWYKRQA LERAYLEALA ALPEPVAPSP EQRALVLETL HEIDAMLDAL
PPIVRRTFLL SQLDGMKYED IAQQLEVSLT SVKRYMAQAF RQCLVAMA
|
|---|
| |