Gene Daci_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3240 
Symbol 
ID5748824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3549549 
End bp3550283 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content62% 
IMG OID641298343 
Producthypothetical protein 
Protein accessionYP_001564263 
Protein GI160898681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00000217367 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGA AACTCGACTC CAACGGCGCG GTTGTTCTGC AAGACGGCGC TCCCGTGTAC 
ATCAAGGACG ACGGCACTGA GATCGCCTTC GATGGCGCCA AGGCCTTCGC CAAGATCGGC
GAGCTGACCG GCCAGAGCGC CGCATACCGC AAGCGCTTCG AGGATGCAGA AAGCAAACTC
AAGGGCTTCG AGGGGATCGC TGACCCGGAC GCTGCTCGCA AGGCGCTGGA AACCCTCCAG
TCGCTGGACC AGAAGAAGCT GATCGACGCT GGCGAGGTGG AGAAGGTCAA GGCCGAGATC
TCCAAGGCGT TCCAGGCTCA ACTGGACGCC GCCAACGGCA CCGCTTCGAA GCTGGAGCAG
CAGTTGTACG CCGAGATGAT CGGCGGAAGC TTCGCCCGCT CCAAGTTCGC TCTGGACAAG
CTGGCGATCC CACCCGACCT GGTGCAGGCC TACTTCGGCA AGGCCTTCAG CATCGAAGAG
GGCAAGGTCG TAGCCAAGGA CGCGAACGGC AACAAGCTCT ACAGCGCAGC CAGCCCGGGC
GACCTGGCAG GTTTCGATGA GGCGCTGGAA ATGCTGGTCA ACCAGTACCC AGGCAAGGAC
CACATCCTGA AGGGCTCCGG CGCTTCTGGC TCTGGCGCGC AGGGCGGCCA TGGTGGTGGC
AAACAACAAG GCAACTTCGG CGGCAGCAAG GCCGAACGTG TTGCCGCAAT GAAGCAACTC
ACATCTGGCG CGTAA
 
Protein sequence
MKLKLDSNGA VVLQDGAPVY IKDDGTEIAF DGAKAFAKIG ELTGQSAAYR KRFEDAESKL 
KGFEGIADPD AARKALETLQ SLDQKKLIDA GEVEKVKAEI SKAFQAQLDA ANGTASKLEQ
QLYAEMIGGS FARSKFALDK LAIPPDLVQA YFGKAFSIEE GKVVAKDANG NKLYSAASPG
DLAGFDEALE MLVNQYPGKD HILKGSGASG SGAQGGHGGG KQQGNFGGSK AERVAAMKQL
TSGA