| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3234 |
|---|
| Symbol | |
|---|
| ID | 5748818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3544141 |
|---|
| End bp | 3544773 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641298337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564257 |
|---|
| Protein GI | 160898675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00173261 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACAC CGGCAAAGGC AAAGCCGGCT GCTGCCATCG GCGCCCGGCC GTATCCACCC
GCTGAACTGG GGCGCTACGT CCCGGCAGAA GGGGTGGCGG AGTGGGTGCA GGCCGAGATC
ATTGCTGAGG ATGGCCGCAT CCACAACCCT GACCACGCGC ACCTGATCGA CGCCGACCTG
GTGTTCCTCT GGGCGCCTGA CGGATTCACA AAGGCCATGA AGACCGTGAT CGGTCAGGCT
GAGGAGGTGA TGATCCGCGC CGGTGGGTGG CAGAAGGGCC GGCAGGAGCA GCAGCTCTAC
GACTGGTTCG GCCGTGTGCC GGCCTTCATG ATCACCCTGG ACGCCACCTA CTGCGCCCAG
TGCTCGGATG CCGAGTGGTG CGCTCTGGTG GAGCATGAGC TGTACCACGT CGCCCAGGCG
CTGGATGAGT TCGGCGCACC CAAGTTCGGG AGAGACGGCA AGCCCAAGCT GAAGATCCGC
GGCCACGATG TCGAGGAGTT CGTCGGCGTG GTCAAGCGCT ACGGCCCGTC GGCCGACGTG
AAGCGGCTCA TGGATGCGGC GAACGCCGGC CCGGAGCTGC GGATGGGAAA TATCGCTCAC
GCATGCGGCA CATGTCTCAA GGTTGCGGCA TAA
|
|---|
| Protein sequence | MATPAKAKPA AAIGARPYPP AELGRYVPAE GVAEWVQAEI IAEDGRIHNP DHAHLIDADL
VFLWAPDGFT KAMKTVIGQA EEVMIRAGGW QKGRQEQQLY DWFGRVPAFM ITLDATYCAQ
CSDAEWCALV EHELYHVAQA LDEFGAPKFG RDGKPKLKIR GHDVEEFVGV VKRYGPSADV
KRLMDAANAG PELRMGNIAH ACGTCLKVAA
|
|---|
| |