Gene Daci_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3229 
Symbol 
ID5748813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3541138 
End bp3541734 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID641298332 
Productlambda NinG family protein 
Protein accessionYP_001564252 
Protein GI160898670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.65785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00866577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTTCC GCCGCACACG CTGCGCCCAC TGCCGCACGC GTTTCGACCC CAAGCGCTAT 
GGCCAGGTGG TGCATGAGGA ATGCGCCGCA GACTGGGCCA TTGCCGAGCG CGAGAAGGAA
GCGCGCAAGG AGGAGAAGCG CCGCCAGGCC GAAGCCAAAG TGCAGCGCGC GCTGGACCGA
AAGAAGCGGG AGCAGCTGAA GACCATTCCG CAACTGACTA AGGAAGCGCA GCTGGCCTTC
AACGCCTACA TCCGTGCCCG TGACCAGGCC GCCGGCTACG ACTGCATCAG TTCTGGCCGC
CCACTGGACT GGTCTGGCAA CGCCGTGGAC GCTGGCCACT ACCGCTCCAC GGGCGCCGCG
CCACACCTTC GGTTCAACGA GGACAACTGC CACGCCCAGA GCAAGCACGA CAACCAGTTC
CTCTCGGGCA ACGCCATTGA CTACCGGATC GGGCTGATTG CCCGTATCGG CCTGGCGCGC
GTCGAGGCCC TGGAAGCCGA CAACCAACCC CGCAAATGGA CCCGCGAAGA GCTGATCGAC
ATTCGCGCCA AGTACCGAGC CAAAGCCAAG CAACTGAAGA AAGAGAGCCA GCAATGA
 
Protein sequence
MTFRRTRCAH CRTRFDPKRY GQVVHEECAA DWAIAEREKE ARKEEKRRQA EAKVQRALDR 
KKREQLKTIP QLTKEAQLAF NAYIRARDQA AGYDCISSGR PLDWSGNAVD AGHYRSTGAA
PHLRFNEDNC HAQSKHDNQF LSGNAIDYRI GLIARIGLAR VEALEADNQP RKWTREELID
IRAKYRAKAK QLKKESQQ