| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3190 |
|---|
| Symbol | |
|---|
| ID | 5748774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3512381 |
|---|
| End bp | 3513016 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298293 |
|---|
| Product | aspartyl/asparaginyl beta-hydroxylase |
|---|
| Protein accession | YP_001564213 |
|---|
| Protein GI | 160898631 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.583182 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCA GGCCCGCCCT GCCCTGCGCG CATGAAGACG CCTGTGCCGG CACGCCCCTG
TTTGCGCGGC TTGATGCCAG GGTTGCGCTG CAGGCGCTGC GCGAGGAGGT GGATGCGCTG
CTGTCCTCGC CATGGTGCGA CCACGTGAAC CACGGCGGCT ACGAAGGCGT ATGGCGTGTG
ATGCCGCTGC GCTGCCAGCG CCAGCATGTG GCGGCCCACC CCATTCTCCA GAGCTTCTCC
ATCGAGGAAC CCGAGGAGGA TTGGAAGGAC CTGCCCCTGC TGCAGCACTG CCCCGCCATA
CGCCAGGTGC TGGAGCAACT GCAATGCCCG CTGCGCTCTG TGCGCCTGAT GCAGCTGAAG
GCTGGCTCCT CCATCAAGCC GCATCGCGAC CATGGGCTGG GCCTGGCGCA TGGCCAGGCC
CGGCTGCATG TGCCCGTGCA CACACATCCC GATGTGCAGT TCATCGTGGA AGGCCGCACG
ATCCCCATGG CCGCAGGGGA GCTCTGGTAT TTCAATGCCG ATGCCACGCA TGAAGTGGTG
AACCGGGGCA CCCGGGACCG CACCCACCTG GTCATCGACT GCCTTGCCAA CGCCTGGCTG
GCAGACAGCA TCGGCAAGGG ACACGCCCAT GCATGA
|
|---|
| Protein sequence | MNARPALPCA HEDACAGTPL FARLDARVAL QALREEVDAL LSSPWCDHVN HGGYEGVWRV
MPLRCQRQHV AAHPILQSFS IEEPEEDWKD LPLLQHCPAI RQVLEQLQCP LRSVRLMQLK
AGSSIKPHRD HGLGLAHGQA RLHVPVHTHP DVQFIVEGRT IPMAAGELWY FNADATHEVV
NRGTRDRTHL VIDCLANAWL ADSIGKGHAH A
|
|---|
| |