Gene Daci_3189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3189 
Symbol 
ID5748773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3511228 
End bp3512388 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content68% 
IMG OID641298292 
Producthypothetical protein 
Protein accessionYP_001564212 
Protein GI160898630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.395511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.630653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGC TGCAGGCGGC CTTTGCCGAA CTGATCGCAA GCCCCCGGCA GCACACCCTT 
TTCCAGCAGG CCAGGAGCAT GGAGTCGCTA CTGGTGCAGC TGCGCCTGCT GTGGTGTCTT
CCCGCCTGGA ACGATGGCCG GCTCATGCAG GCGCTGCAGC AGTTGAACCA GGCGGCCGCC
GTGCCAACTG CCGCACTGCT GGCCGGTGGC TGGCTGCCAC ACAGGTATGA GGCACGCACG
CGCAGCATCC TTTGGTGCCT GCCGGACGGC CCCGCCACCG AGCCGTTTCA TGACGAGTAC
ATCAGCCGCT GCCTGCAGCG CAGGCTGCTC AACCAGTTCA TCCGGCCGCG CACGCCGCTG
GCCGGCCTGT GCGCGGAATC CCTTCCCAGG CCCGGGGGCC ATCCGCCTGC CGGCTTCATC
TTCCACCTCT CGCGCTGCGG CTCCACCCTG GTCTCGGGCT GCCTTTCCGA ACTGGACGGC
ACACTGGTCC TGTCGGAGCC ACCTGTGTTC ACCGAGCTGC TGCTGGACAG CTCGCTGGAC
CGGGCGCAAA AGCGCGATGG CATTGCCGGC CTGGTGTCGG CCATCACCGT GGCCGTGCCG
GGGCGCCGCA ACCTGGTGGT CAAGTGGAAT GCCTGGGACA TTTTCCAGTG GGAGCTGCTG
CACGATCTCT ACCCCGAGGT CCCCGGCCTG ATGCTGGTCC GCGATCCTGT GGAGATCCTG
GCCTCACACC ACAGGCAGGC CGGCCGGCAC ATGTCGGGCG ACCCGTCGCT GGCTGGCGCC
GGTCCGGTTT TCTGTTGCGG CAGTGGCAGC CAGCCCTTTG TCTCCGTGCT CGACCACCGC
ATGCGCGTGC TGCAGGCGAT GATGGAGCGG ATGCGGGATC TGCACGAAAG CCAGGGCGTT
CCTGTGCTGC ACTATCGCCA GCTGGATGCC GAAGCCATGG AGCAGATAGC CCGGCGCTTC
GACCTGCATG CAGGCGAGGC GGCGCGCCAG CGCATCGCCG CACGCCTTCG CCAGCATGCC
AAGGCGCTGG ACCAGCGCTT CGAGCCTGAC GGGCGGGACA AGGCAGCCGT CTTTGGCGAA
GGCGAACGCC AGCACATCGA GGCGCACCTG GGTCCGCTGC ACGCACAGCT GCTGCGGCGC
GCACAACCCG TGCACGAATA G
 
Protein sequence
MHELQAAFAE LIASPRQHTL FQQARSMESL LVQLRLLWCL PAWNDGRLMQ ALQQLNQAAA 
VPTAALLAGG WLPHRYEART RSILWCLPDG PATEPFHDEY ISRCLQRRLL NQFIRPRTPL
AGLCAESLPR PGGHPPAGFI FHLSRCGSTL VSGCLSELDG TLVLSEPPVF TELLLDSSLD
RAQKRDGIAG LVSAITVAVP GRRNLVVKWN AWDIFQWELL HDLYPEVPGL MLVRDPVEIL
ASHHRQAGRH MSGDPSLAGA GPVFCCGSGS QPFVSVLDHR MRVLQAMMER MRDLHESQGV
PVLHYRQLDA EAMEQIARRF DLHAGEAARQ RIAARLRQHA KALDQRFEPD GRDKAAVFGE
GERQHIEAHL GPLHAQLLRR AQPVHE