| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3183 |
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| Symbol | |
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| ID | 5748767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3504276 |
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| End bp | 3505202 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298286 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001564206 |
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| Protein GI | 160898624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.236625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.225652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGCA ACACGTTTCT CCGGCGCATG CTGGCCGGCG CATTCACATT CGGCCTGCCG
GCCAGCCCGG CGCTTGCACA GCCGGGCCCC GGCCCCAGCC CTGCCCGCAC CATCGGCGTG
TCCCTGCTCA CGCAGCAGCA CCCGTTCTAC CTGGAGCTGG CCCAGGCCAT GCAGCAGGAA
GCCGCGCGGC AGGGGCTGAA GCTGGACCTG AGCATTGCCA ACCAGGACCT GGGCAAGCAG
ATCTCCGATG TGGAGGACTT CGTCAGCAAG AAGGTCGATG CCATCATCCT GTCGCCCGTG
GATTCACGCG GCGTGAAGGC CGCCGTGCTC AAGGCTGCCG CCGCCCGCAT TCCCGTGATC
ACCGTGGACA TTGCAGCCAG CGGGGTCGAG GTCGCATCGC ACGTGGCCAC CGACAACCGC
GCCGGCGGCG TGCTGGCCGG CCAGCTCATG GGTCGGGCCA CCGGCGGCAA GGGCCAGATC
GGCGTGCTGC ACTACCCGTC CATACAGTCC GTGGTCGATC GCGTGGAGGG TTTCAAGGCC
GCCATCGCCA CCTTCCCCGG CATGAAGATC GTCTCCGTGC AGCCGGGCAT CACGCGGGCC
GAGGCCCTGG CCGCTTCGCA GAACATGCTG CAGGCCCACC CCGATCTCGC GGGCATCTTC
GGGTTTGGCG ACGACGCGGC CCTGGCTGCA CTGGCCAGCG TCAAGGGCGC AAAAAAGCTG
GAGCAGGTCA AGATCGTCGG CTTTGACGGC ATGGCCGAGG CGCGCGCGGC CGTGGACCGC
GAACCAGCCT TTGTGGGCGT GATCCGCCAG TACCCCGACC AGTTGGGACT GCAAGCCGTG
GCCATTGCCG CGCAGCTGCT GTCGGGCAAG CCGGTGGAAA AATTCCACCC CGTGTTGCCC
GGCGTGTACA CGGCTGCCGC CAGATAG
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| Protein sequence | MDRNTFLRRM LAGAFTFGLP ASPALAQPGP GPSPARTIGV SLLTQQHPFY LELAQAMQQE
AARQGLKLDL SIANQDLGKQ ISDVEDFVSK KVDAIILSPV DSRGVKAAVL KAAAARIPVI
TVDIAASGVE VASHVATDNR AGGVLAGQLM GRATGGKGQI GVLHYPSIQS VVDRVEGFKA
AIATFPGMKI VSVQPGITRA EALAASQNML QAHPDLAGIF GFGDDAALAA LASVKGAKKL
EQVKIVGFDG MAEARAAVDR EPAFVGVIRQ YPDQLGLQAV AIAAQLLSGK PVEKFHPVLP
GVYTAAAR
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