Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3177 |
Symbol | |
ID | 5748761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3497189 |
End bp | 3498232 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298280 |
Product | bile acid:sodium symporter |
Protein accession | YP_001564200 |
Protein GI | 160898618 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.98524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0121029 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCACGCC CCCGCTTCGC CCCTGACAAT TTCACGCTGA TGCTGCTGTC CACCGTGGCA CTGGCCAGCT TCCTGCCCGC CTCGGGCGCC GTATCGCAAT GGCTGGAGGT GGCAACCACG CTCATGGTCA GCCTGCTGTT CTTCCTGCAC GGCGCCAAGC TCTCGCGCGA GGCCATCTTT GCCGGCATAG GCCACTGGCG CCTGCACCTG ACCATCTTTG CCGCCACCTT CGTGCTCTTT CCCCTGCTGG GCTGGGCGCT GCGCCCCGTG CTGGAGCCAC TGGTCACGCC CGAGATGTAC ATGGGCGTGC TCTTTCTGTG CACGCTGCCG GCCACGGTGC AGTCGGCCAT CGCCTTCACG GCCATGGCGC GCGGCAACAT GCCCGCCGCC GTGTGCAGCG CATCGGCCTC CACGCTGATG GGCATCGTGA TCACGCCCAT CCTGGTCAGC ATGCTGCTGC ACAAGAGCGC CGAAGGGGGC GATGCGCTGC AGGCCATCGG CAAGATCGCG CTGCAGCTGC TGCTGCCCTT TGTGCTGGGC CATCTGCTGC GGCCCGTGAT CGGCGGCTTC ATCTCGCGCC ATGCCAAGCG CGTGAAGTTC GTGGACCAGG GCTCCATCCT GCTGGTGGTG TACACGGCCT TCAGCGCCGC CGTCATCAGC GGCCTGTGGC AGCAGACGCC CCTGCCTGCG CTGCTGGGCC TGCTGCTGCT GTCGTCCATC CTGCTGGCCC TGGTGCTGGT CATCACGTCG TGGACGGCGC GCCGCCTGGG CTTTTCCAAA GAGGACGAGA TCACCCTGGT GTTCTGCGGC TCCAAGAAGA GCCTGGTCAG CGGCGTGCCC ATGGCCAAGG TGCTGTTCGA GTCCAGCGCG GTGGGCGCCA TCGTGCTGCC GCTGATGGTC TTCCACCAGC TGCAGCTCAT GGTCTGCGCC GTGCTGGCCC AGCGCTATGC ACGCCGGCCC ATGCATCCCG AGGCGATCGA GGATGGCGCC GTGCCCGCCA GCGCTGCGCC GGCCGCCAAG GCCGAAACGG CGCCGGCCAA ATAA
|
Protein sequence | MARPRFAPDN FTLMLLSTVA LASFLPASGA VSQWLEVATT LMVSLLFFLH GAKLSREAIF AGIGHWRLHL TIFAATFVLF PLLGWALRPV LEPLVTPEMY MGVLFLCTLP ATVQSAIAFT AMARGNMPAA VCSASASTLM GIVITPILVS MLLHKSAEGG DALQAIGKIA LQLLLPFVLG HLLRPVIGGF ISRHAKRVKF VDQGSILLVV YTAFSAAVIS GLWQQTPLPA LLGLLLLSSI LLALVLVITS WTARRLGFSK EDEITLVFCG SKKSLVSGVP MAKVLFESSA VGAIVLPLMV FHQLQLMVCA VLAQRYARRP MHPEAIEDGA VPASAAPAAK AETAPAK
|
| |