Gene Daci_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3175 
Symbol 
ID5748759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3495502 
End bp3496032 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID641298278 
Productacireductone dioxygenase ARD 
Protein accessionYP_001564198 
Protein GI160898616 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.178399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00313013 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGCCC TCGCATCCCA CCGGGTTTCC GACGCGGACT TCGTGGCCGC CATCGGCGTG 
CAATGGCAGC ACCGCCCGCT GGCGCCCGAG CCCGGCCTGG CCGCGCTGCT GGCACAGGCC
CAGCTGGACG ATGGCGGCAA GGCCACCGTG GTCCAGGCCG TGGGCATGCT GGTGGTCGAC
GAATGCGTGG CCCATGGCTA CCACAGCATG GACCTGGTCG TGCTGCACCC AGGCACCCCG
GGCCTGGACG AGGCGCTGGA GCGCTTCGAC AAGCCCCACA CCCATGCCGA TGACGAGGTG
CGCTACATCC TCGAAGGCGA AGGCCTGTTC GGCTTCTTTG ATGCCGGCGG CCAAGAGCGC
GTGCTGCGCG TGCAGCCCGG CGACTACCTG CGCATACCGG CCGGCGTGGA GCACCGCTTC
ACGCTGACCG CCACGCGGCG CATCAAGGCG CTGCGCCTGT TCGCCGATAC GGCGGGCTGG
GTGGCGCAAT ATACCCAGCG GCCCGCCGCT GCCATGGAGG TGCCTGCATG A
 
Protein sequence
MGALASHRVS DADFVAAIGV QWQHRPLAPE PGLAALLAQA QLDDGGKATV VQAVGMLVVD 
ECVAHGYHSM DLVVLHPGTP GLDEALERFD KPHTHADDEV RYILEGEGLF GFFDAGGQER
VLRVQPGDYL RIPAGVEHRF TLTATRRIKA LRLFADTAGW VAQYTQRPAA AMEVPA