Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3175 |
Symbol | |
ID | 5748759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3495502 |
End bp | 3496032 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298278 |
Product | acireductone dioxygenase ARD |
Protein accession | YP_001564198 |
Protein GI | 160898616 |
COG category | [S] Function unknown |
COG ID | [COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.178399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00313013 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTGCCC TCGCATCCCA CCGGGTTTCC GACGCGGACT TCGTGGCCGC CATCGGCGTG CAATGGCAGC ACCGCCCGCT GGCGCCCGAG CCCGGCCTGG CCGCGCTGCT GGCACAGGCC CAGCTGGACG ATGGCGGCAA GGCCACCGTG GTCCAGGCCG TGGGCATGCT GGTGGTCGAC GAATGCGTGG CCCATGGCTA CCACAGCATG GACCTGGTCG TGCTGCACCC AGGCACCCCG GGCCTGGACG AGGCGCTGGA GCGCTTCGAC AAGCCCCACA CCCATGCCGA TGACGAGGTG CGCTACATCC TCGAAGGCGA AGGCCTGTTC GGCTTCTTTG ATGCCGGCGG CCAAGAGCGC GTGCTGCGCG TGCAGCCCGG CGACTACCTG CGCATACCGG CCGGCGTGGA GCACCGCTTC ACGCTGACCG CCACGCGGCG CATCAAGGCG CTGCGCCTGT TCGCCGATAC GGCGGGCTGG GTGGCGCAAT ATACCCAGCG GCCCGCCGCT GCCATGGAGG TGCCTGCATG A
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Protein sequence | MGALASHRVS DADFVAAIGV QWQHRPLAPE PGLAALLAQA QLDDGGKATV VQAVGMLVVD ECVAHGYHSM DLVVLHPGTP GLDEALERFD KPHTHADDEV RYILEGEGLF GFFDAGGQER VLRVQPGDYL RIPAGVEHRF TLTATRRIKA LRLFADTAGW VAQYTQRPAA AMEVPA
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