| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3169 |
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| Symbol | |
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| ID | 5748753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3487464 |
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| End bp | 3488948 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298272 |
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| Product | gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_001564192 |
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| Protein GI | 160898610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0153486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000801233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCAG CCGACCCCAG CGCAGCCACC CCCACCGCCG CCACCGGTTC CCCCACCGCC
GCGCCACCTG CCGACTACAG CGGTGCCCGC CCCCCGCCAC CGCGCAGGCC CAGGCGCCGC
TGGCGCAGGC TGCTGCTCGT CCTCTTGCTG CTGGCCGTGC TGTTTGCCAT TGCCGCCGTC
TGGGGCAACC GGCCCCATGT GCCGCAGCGC GAGCCGCAGG CCGTGCACCG CAGCCCGCAG
CAGCTGGCCC AGGGCCTGTA CCTGGCGCGC GCCGCCGACT GCATGGCCTG CCATGACGGG
GTGGGTGGCA TGGGTGGCGC CCGGGAAGGC CAGCCCTTTG CGGGCGGCAA GCCCCTGCCC
ACGCCCTTCG GCACCCTCTA CGGCACCAAC ATCACCCCCG ACCCCGACCA CGGCATAGGC
CGCTGGACGG CCGAGGAATT CCACGCCGCC GTCACCCGCG GCACGGCGCC GGGCGGGCGC
CAGCTCTACC CGGCCATGCC CTATGCCTCC TACCACCTGA TGAGCCGCGA AGACTCGGAC
CTGATCTACG GCTACCTGAT GAACATCCGG CCCGTGGCCC AGCCCAACAC CAAGCCCGCC
CTGCCCTTCC CCTTCAACCT GCGCGTGCTC ATGTTCGGCT GGAAGGCGCT GTTCCTGTCC
AGCGCGCCCC TGCCCGTGGG CTCGCAGGGC CAGAGCCCAG CCTGGCTGCG CGGGCAGTAC
CTGGGCAATG TCATGGGCCA CTGCGCCGAA TGCCACACGC CGCGCGGCAT GTTCGGCCAG
ATGCAGAAGG ACCGCTGGCT GCAGGGCGGC ACGCTGTCGC TGTTCACGGC CCCCGGCATC
ACCGCCGAAG CCCTGGCCGC ACGCGGCTGG ACGCGCGAGG GCATGGCCCA GTTCCTGCAG
ACGGGCTTTT CGGCCCACGG CAGCGCCTTC GATGAAATGC ACGAGGTCAT TGCCAACAGC
ACCCGGTACC TCACGGCCGA GGACATGACG GCGCTGTCCA CCTTCCTGCT GGGCGACAAC
CCGCCCGCGC CCCAGCCCCT GCCGGCCGCC GTGTCCCCGG ATTCCGGCAC CGGCAACAGC
GGGGGCAATA GCGCGGGCAA TGGCGCCGGC AACGGTGCGG GCACGCTGGA CGCAGGCCGG
GGCCACTACA TGGCGCTGTG CGCCAGCTGC CACGGCAGCG AGGGCCTGGG CCGCAGCCTC
ACCATGCCCC CGCTCAAGGG CAACAGCACC GTGCGCCAGG CCGACGCCCG CAACCTGGTG
CTGGCCATCC TCGTCGGCCT GCCCAAGCAC CCAGCCACCC AGCAGGGCCC CACGCCCCTG
CCCGGCATGC CCGGCTTCAT TCAGGAGCTG ACCGATGGCG AAGTCGCCGC CCTGGCCAAC
TACACCCGCA CCACCCTGGG CGGCCAGCCT GCCGATGTGA CAGCCGCCCA GGTGGCCGAC
CTGCGCAGCG CAGCCGGAAA GTCAGGGCAC AAGGCTGCGC CGTGA
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| Protein sequence | MSAADPSAAT PTAATGSPTA APPADYSGAR PPPPRRPRRR WRRLLLVLLL LAVLFAIAAV
WGNRPHVPQR EPQAVHRSPQ QLAQGLYLAR AADCMACHDG VGGMGGAREG QPFAGGKPLP
TPFGTLYGTN ITPDPDHGIG RWTAEEFHAA VTRGTAPGGR QLYPAMPYAS YHLMSREDSD
LIYGYLMNIR PVAQPNTKPA LPFPFNLRVL MFGWKALFLS SAPLPVGSQG QSPAWLRGQY
LGNVMGHCAE CHTPRGMFGQ MQKDRWLQGG TLSLFTAPGI TAEALAARGW TREGMAQFLQ
TGFSAHGSAF DEMHEVIANS TRYLTAEDMT ALSTFLLGDN PPAPQPLPAA VSPDSGTGNS
GGNSAGNGAG NGAGTLDAGR GHYMALCASC HGSEGLGRSL TMPPLKGNST VRQADARNLV
LAILVGLPKH PATQQGPTPL PGMPGFIQEL TDGEVAALAN YTRTTLGGQP ADVTAAQVAD
LRSAAGKSGH KAAP
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