| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3166 |
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| Symbol | |
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| ID | 5748750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3483272 |
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| End bp | 3484777 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298269 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001564189 |
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| Protein GI | 160898607 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.130976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000354644 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAACG CCGCCACGCC CCATTCCACC CTGGTCTTCG AACAGCGCAC GCTGACCGGC
GCCGCCCAGC AGCAGCGCGG CCGCCAGCTG GCCCAGGGCC TGCGCAGCCT GGGCCTGGCC
GAAGGCGACG TGCTGGCCGT CTTCCTGCGC AACGGCATCG AATACGCCGA CGTGGTCCAT
GCCTGCCGCA TTGCGGGCAT CTACTACTGC CCCGTCAACT GGCATTTCAC GGCCACGGAG
ATCGACTACA TCCTGGCCGA CAGCGGCGCC CGCGCCCTCA TCACCAGCCA GGACCTGCTC
GACGGCCTCA AGGGCGAACT CTATGCGGAC CTGCCCCGGC GCGTCGCCCA CGCACGCGAG
CCGGAGCAGG ACTACGAAAC CTGGCTGGCC GCCCAGGCAC CCTACGACGG CCCGCTGGTC
GCGCCGCGCG GCCACATGGC CTATACATCG GGCACCACGG GCCGTCCCAA GGGCGTGCTG
CGCAAGGCGT TTCCCGTGGA AGAGCTGCCT CGGCGCCTGG CCGTGAACCA GGCGCTGATC
GCCACCGCCT ACGGCCTGCA GCCCGGCGCG CGCACCCTGC TGACCGCGCC CATCTACCAC
AGCGCACCCA GCCTGTACTT CCAGAACGCG CTCATGCTCA GCGAGCTGGT GGTGCTGGAG
CAGCGCTTCG ACCCCGAGCG CTTCCTGCAG CTGGTGCAGG AGCACCGCAT CGACACCGCC
TACATGGTGC CCATCATGTA CGTGCGCCTG CTCAGGCTGC CGCGCGAAGT GCGCGAGCGC
TACGACATCT CCTCGCTGCG CTTCATCGCC TCCACCGGCT CGCCCTGCGC GCCCGAGGTC
AAGAAGGCCA TGATCGAGTG GATGGGGCCC ATCATCAACG AGACCTATGC CTCCAGCGAG
TCGGGCCTGG TCACCTTCAT CGGCTCGGCC GACGCCCTCA CCCACCCGGG CAGCGCGGGC
CTGCCGCTGC AGGACGCCGA AGTCCGCATC CTGGACAGGC AGGGCCAGGG CCTGCCCACG
GGCGAGGTGG GCCTGATCTA CGTGCGCCAG CCCGCCTATG CCGACTTCAC CTACAAGGGC
AACGAAGAGG CCCGCCGCAA GATGGACCAG GGCGGCCTGA TCACCCTGGG CGACATGGGC
TACCTGGACG AAGAAGGCTT TCTCTACGTC TGCGACCGCG ACTCGGACAT GGTGATCTCC
GGCGGCGTGA ACATCTACCC GGCCGAGATA GAGAACGAGC TGCTCAGGCA CCCCGGCATA
GCAGACTGCG CCGTCATCGG CGTGCCCGAT GCCGAGTACG GCGAACGGCT GCTGGCCCTG
GTCGAGCCCG GCCAGTCAGG CACACTGCCC GAGGCGGAAC TGAAAGAATG GCTGCGCGGC
CGGCTGGCGG CCTACAAGCT GCCGCGCAGC TTCGTCTTCC AGCGCCTGCC CCGCGACGAC
AACGGAAAGA TCGCCAAAAG AAAGCTGCGT GACGCCCACT GGGGCGCGAC GCAGCGCAAG
ATCTGA
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| Protein sequence | MSNAATPHST LVFEQRTLTG AAQQQRGRQL AQGLRSLGLA EGDVLAVFLR NGIEYADVVH
ACRIAGIYYC PVNWHFTATE IDYILADSGA RALITSQDLL DGLKGELYAD LPRRVAHARE
PEQDYETWLA AQAPYDGPLV APRGHMAYTS GTTGRPKGVL RKAFPVEELP RRLAVNQALI
ATAYGLQPGA RTLLTAPIYH SAPSLYFQNA LMLSELVVLE QRFDPERFLQ LVQEHRIDTA
YMVPIMYVRL LRLPREVRER YDISSLRFIA STGSPCAPEV KKAMIEWMGP IINETYASSE
SGLVTFIGSA DALTHPGSAG LPLQDAEVRI LDRQGQGLPT GEVGLIYVRQ PAYADFTYKG
NEEARRKMDQ GGLITLGDMG YLDEEGFLYV CDRDSDMVIS GGVNIYPAEI ENELLRHPGI
ADCAVIGVPD AEYGERLLAL VEPGQSGTLP EAELKEWLRG RLAAYKLPRS FVFQRLPRDD
NGKIAKRKLR DAHWGATQRK I
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