| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3165 |
|---|
| Symbol | |
|---|
| ID | 5748749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3482261 |
|---|
| End bp | 3483238 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641298268 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001564188 |
|---|
| Protein GI | 160898606 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.209597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000237032 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGG CCATTGCATT GCTGCTTGCC GCTGCGGCCA CCGCAGCCGC AGCCCCCGGG
TTCGCCCAGT CCGACTACCC CAGCAAGCCC ATCAAGCTCA TCGCCCCGTA TGCGCCGGGC
GGCTCGGTCG ATGTGCTGGC CCGCACCCTG GCCACGCACC TGTCCACGGA GCTCAAGCAG
TCCGTGGTCG TGGAGAACCG GCCGGGCGCC AACACCATGA TTGCCGCCTC GGCCGTGGCG
CGCTCGCCGG CCGACGGCTA CACCCTGCTG CTGGCCAGCA ATGCCAGCAT GGTGCTCAAC
CCCCTGCTCT ACAAGAAGCT GAGCTACAAC CCCGACCGGG AGCTGAAGCT CACCAACATC
CTGGCCGAGG CCCCGCTGGT GCTGGTCACC AACAGCCAGA CCGGCATCAA GAACGTGGCC
GACCTCAAGG CCTACTCCAA GGCCCACGCG GGCAAGCTCA ACTACAGCTC GGTCGGCCTG
GGCAACCCGC TGCAGCTGAC CACCGAGCTG ATCAAGTCCC GCCTGGACGT GGCCGCCACC
CACATTCCCT TCAACGGCAG CGCGCCGGCC CTCACCGCCC TCATGGCCAA CGACACCCAG
CTCATGGTGG ACGTGGCCGG CACCTCCCTG CCCCACATCA AGGCCGGCAA GCTGGTGGCC
ATTGCCACCA CCGGGCCGGA GCGCTCGCAG TTCCTGCCGC AGACGCCCAC CATTGCCGAA
TCGGGCGTGC CCGGCTTCAG GGCCTCCACC TGGTTCGGCA TTGCCGTGCC CGCAGGCACG
CCCGCGGACG CGCGCAACAC CCTGCAGGCC GCCGTCAACA AGGTCATGCT CAACCCCGAG
TTCGCCAGTG CCCTGGGCAA CCAGACCCTG GCCGCCAGAA AGCCCCAGAC CCAGGCCCAG
CTCGACGACT TCCTGGCCGC TGACGGCCAG ATGTGGCGCA AGGTGATCGC GGACAACGCG
ATTGCGCTGG AGAACTGA
|
|---|
| Protein sequence | MNKAIALLLA AAATAAAAPG FAQSDYPSKP IKLIAPYAPG GSVDVLARTL ATHLSTELKQ
SVVVENRPGA NTMIAASAVA RSPADGYTLL LASNASMVLN PLLYKKLSYN PDRELKLTNI
LAEAPLVLVT NSQTGIKNVA DLKAYSKAHA GKLNYSSVGL GNPLQLTTEL IKSRLDVAAT
HIPFNGSAPA LTALMANDTQ LMVDVAGTSL PHIKAGKLVA IATTGPERSQ FLPQTPTIAE
SGVPGFRAST WFGIAVPAGT PADARNTLQA AVNKVMLNPE FASALGNQTL AARKPQTQAQ
LDDFLAADGQ MWRKVIADNA IALEN
|
|---|
| |