Gene Daci_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3154 
Symbol 
ID5748738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3470953 
End bp3471261 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content52% 
IMG OID641298257 
ProductXRE family transcriptional regulator 
Protein accessionYP_001564177 
Protein GI160898595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000123737 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000122255 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGACG CAGATGAACA ATGGGGCGCG AGGCTCAAGC AAGCTCGGCT TGCAGCAGAC 
CTGTCCCAAA AAATGCTGGG AATTGAAGCT GGAATCGATC CGTTTGTGGC GAGTGCGCGG
ATCAATCGCT ATGAGCTGGG GAAACACAAA CCAGACTTGC TGACTGTGCG TAAGCTGGCG
GAAGTGCTCA AGGTTCCGAT GGCGTTTTTC TATTCGGATA CGGATGATGA AGTGGCGGAG
TTGTTGCTCA GGTATGGGGT TTCGGGTGAG GAAGTTAGGA AACGGGTGAG GGATGTATTG
AAGGATTAG
 
Protein sequence
MSDADEQWGA RLKQARLAAD LSQKMLGIEA GIDPFVASAR INRYELGKHK PDLLTVRKLA 
EVLKVPMAFF YSDTDDEVAE LLLRYGVSGE EVRKRVRDVL KD