Gene Daci_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3152 
Symbol 
ID5748736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3469350 
End bp3470390 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID641298255 
Producttransport system permease protein 
Protein accessionYP_001564175 
Protein GI160898593 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000309752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000937793 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGACCT TCGTGAACAC ATCCGTTGTG CGCTGGGGAG CCTGTTCGTT TCTCTGGCGG 
CCCAGGCCGC TGGCCGTGGG CATGGCGCTG GTCGTGCTGG CCCTGGTGCT GGGTGTGCTG
CTGCTGGGCA CGGGAACCCT GTCCCTCAGC CCCGCCGAAG TGCTTGACAG CCTGCTGGGC
ACGGGCTCCA ACCCCGCAGC TGAGCGCATC GTGCAGCGGG TGCGGCTGCC GCGTGTCCTC
ACGGCCGTCT TCGTGGGCGC GTCTCTTGGC ATGGCGGGCG CCATCTTCCA GTCCATCTCC
CGCAACGCGC TGGGCTCGCC GGACGTGATC GGCTTCACCA CCGGCGCGGC CAGCGGGGCG
ATTGCGCTCA TCGTGCTGGG TGACGCCGGG CCGCTGTGGA CATCGCTGGC CGCCGTGCTG
TCGGGCATGG CCACGGCGGC GGTCGTGCTT GCGCTGTCCG GGGGCCAGCG TGCTGGCGGC
GGCTACCGGC TGGTGCTCGT GGGCATAGGC GTGGGGGCCA CGCTCTCGGG CCTGAACACC
ATCTTGCTGG TCATGGGGGA CCTGGACCGG GCCGTCGCCG CGCAGCGCTG GCTGGCCGGC
TCGCTCAGCG CGCGGACCTG GGCGCATGTC GCGCCCGCCG CGCTGGGCTT CATCGCCATC
GTGCCCGTCG TGCTGTGGTG CGCCCGCCGC ATCAACCTGC TGGAGCTGGG CGACGATGCC
GCCACCCAGC TCGGCGTCAA CGTGCCGCGC ACGCGGCTCA CCATGGTGAT GGCTGCAGTG
GCCCTGACCG CCATCGCCAC GGCAGCGGCG GGGCCCATCG CCTTCATCGC GCTGGCCGCG
CCCCAGGTGG CCAGGCGCCT GGGCCTGTCG CCCGACGTGC CCCTGTGCAC GGCGGCAGCC
ATGGGCGCCG TTCTGCTGCT GGCGGCCGAC ATGCTCAGCC AGTGGGCACC CGTGCGCCTG
CATCTGCCCA TCGGGCTGGT GACGGGGCTG CTGGGCGGGG TGTATCTGCT GTGGCTGCTG
TTTCGCACGC GCAAGGGATA G
 
Protein sequence
MKTFVNTSVV RWGACSFLWR PRPLAVGMAL VVLALVLGVL LLGTGTLSLS PAEVLDSLLG 
TGSNPAAERI VQRVRLPRVL TAVFVGASLG MAGAIFQSIS RNALGSPDVI GFTTGAASGA
IALIVLGDAG PLWTSLAAVL SGMATAAVVL ALSGGQRAGG GYRLVLVGIG VGATLSGLNT
ILLVMGDLDR AVAAQRWLAG SLSARTWAHV APAALGFIAI VPVVLWCARR INLLELGDDA
ATQLGVNVPR TRLTMVMAAV ALTAIATAAA GPIAFIALAA PQVARRLGLS PDVPLCTAAA
MGAVLLLAAD MLSQWAPVRL HLPIGLVTGL LGGVYLLWLL FRTRKG