| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3147 |
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| Symbol | |
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| ID | 5748731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3463202 |
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| End bp | 3465337 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298250 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001564170 |
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| Protein GI | 160898588 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.116125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000946048 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGCGA CCTTTGAAAA ATACGAATCA TTCTCATCAA AGGAAGATGC TGTGAAGCTG
TGTTTCCATC GCAGGCTCCC GTCCCGGGCG GGCGCCATCG CACTCTCTAC CCTGATGGCG
CCGGCCGGCG CCTTCGCTCA GGGCACGTCG GGTTCCGGGG GGGAATCCAA CGCGCTTGAA
GCGGTCGTGG TCAGCGGAGA AAAGGTCAGG CGCGAACTCA AGGACACGGC CTCCTCCGTG
TCGGTCAAGG CCGGCAAGGA CCTGGCCCGG CAGGAGTCCG GCAATGCCTC GGTCCACGAG
GTGCTGCACG ACGTGCCCAA CGTGGTCTAC ACCGACACGG TGGGCGCGCC CATCATCCGC
GGGCAGGACA CGCAGGGCCC CAACAACGGC CAGAACGTCT TTTGGGGCGG CACGGTGCCG
CGCGCCACCA TCAACCTGGA TGGGCACTAC CTCAACTACA ACGAGATGTT CTTCGGCGCG
ACCTCGGTCT GGGATGTGGA GAGCATCGAG GTGTTCCGCG GCCCGCAGAC CACCTCGCAG
GGCGCCAATG CCATTGCGGG CGCCATCGTC GTGAACACCA AGGACCCCAG CTTCAAGCGC
GAAGGGGCCT ACCAGCTGGA GGCGGGCGAC TACCACTCGC GGCGTGCGTC CATCGCCGTC
TCCGGCCCCG TGGGCGAGGA GCTGGCCGCG CGGCTGGCCG TGGACTACTC GGGGCGCGAT
ACCTTCATCG ACTACACCAA TCCGCAGTTC CAGCGAGGCC AGGCCGATCA GGATTTCCGC
GCGCTGAATG CACGCATGAA GTTCCTGTGG CTGCCCAGCC GCATTCCGGG CCTGGAGGCC
AAGTTCACCT ATTCCCACAA CGACAGCAAC CGTCCCAGCC AGGAGGCGGC GTCCGCTCCG
TTCACCGCGC TGGAGCACTG GACGACGACC ATGCCCAGCT GGAAGCAGAA GACCGACACC
GGCATCCTCG ACCTCAGCTA CGAGCTGGGC AACGGCGTGC GGCTGGTCAA CCAGTCCCAG
TATTCGCGCT CGTCCGTGCA GCGCTATACG GGCATTCCCG GCGAGGGCGA TGCCGATATC
CGCCAGAACA ATGTCTCCAA TGAGTTCCGC GCCCTGGTGG GCAGCGACAA GGACCGCCTG
AGCGGCTTCG GCGGCGTCTA CTACGCGCGC ACCGGCACGG ACGAAAGCCT GCTGCTGCGC
GGCCTGTCCG CCTTCGACGA CACGAAGAAG AACCTGGGCG TCTTCGGCGA GCTGAACTGG
CGCCTGGCCA ACCGCTGGAC CCTGACCAGC GGCCTGCGCT ACCAGCAGGA CGAGGTGGTG
CGCACCGGCA CTTCGGTGCT GGCACCCACC GCCCTCGACT ACACGAAAAC CTTCTCGGCC
CTGCTGCCCA AGCTGTCCCT GGCCTATGCC GCCACACCGC GCTGGACCGT GGGCGCGCTG
GTCAGCCGGG GCTACAACCC GGGCGGTGTG TCGCTGAACC TCACCAGCCG GCAGTGGGCG
TATTTCAAGA AGGAGTCGAT CTGGAACTAC GAGCTGTTCA GCCGCGCCAG CCTGCTCGAT
GACCGGCTGA TGCTCAACAC CAACCTGTTC TACATGGACA TGCGGGACGC GCAGTACAAC
ATCCCCGTGG TCATCTCCCC GGGCGTGGCC CAGTCCTACA CCATCAACGC GGAGAAGGCC
CATGCCTACG GCTTCGAGCT GGGCGCCGAC TACCGCGCGC TGGACAACCT GCGGATCAAG
GCCGGCGTGG GCGTGCTGCG CACCCGCATC GAGGAGATGG GCAGCAACCC CGGCTACGAG
CACAACCGCT TCGCCCGCTC GCCCGGCTAC AACCTGAGCC TGGGCGTGAG CTGGGACGCC
AGCCCCCGGT TCAATGTCTC CGGCCAGGTG CGCCATCTGG ACGGCTACTA CTCCGATACC
GCCAACACGC GCGCCTATGC GGTCGGCTCC AACACCATCG CCGACCTGCG CATGACCTAT
GCCTACAGCG CGCGCGTGCA GCTGTACGGC TATATCAAGA ACGTGTTCGA CAGGCGCGCA
CCGACGTACC TGCAGCAAAA CCGGGGCATC GGCGGCATCG AGGCCAGCAT GACCGCGCCG
CGCATGATCG GCGTGGGCGT GCGCGGAACG TTCTGA
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| Protein sequence | MMATFEKYES FSSKEDAVKL CFHRRLPSRA GAIALSTLMA PAGAFAQGTS GSGGESNALE
AVVVSGEKVR RELKDTASSV SVKAGKDLAR QESGNASVHE VLHDVPNVVY TDTVGAPIIR
GQDTQGPNNG QNVFWGGTVP RATINLDGHY LNYNEMFFGA TSVWDVESIE VFRGPQTTSQ
GANAIAGAIV VNTKDPSFKR EGAYQLEAGD YHSRRASIAV SGPVGEELAA RLAVDYSGRD
TFIDYTNPQF QRGQADQDFR ALNARMKFLW LPSRIPGLEA KFTYSHNDSN RPSQEAASAP
FTALEHWTTT MPSWKQKTDT GILDLSYELG NGVRLVNQSQ YSRSSVQRYT GIPGEGDADI
RQNNVSNEFR ALVGSDKDRL SGFGGVYYAR TGTDESLLLR GLSAFDDTKK NLGVFGELNW
RLANRWTLTS GLRYQQDEVV RTGTSVLAPT ALDYTKTFSA LLPKLSLAYA ATPRWTVGAL
VSRGYNPGGV SLNLTSRQWA YFKKESIWNY ELFSRASLLD DRLMLNTNLF YMDMRDAQYN
IPVVISPGVA QSYTINAEKA HAYGFELGAD YRALDNLRIK AGVGVLRTRI EEMGSNPGYE
HNRFARSPGY NLSLGVSWDA SPRFNVSGQV RHLDGYYSDT ANTRAYAVGS NTIADLRMTY
AYSARVQLYG YIKNVFDRRA PTYLQQNRGI GGIEASMTAP RMIGVGVRGT F
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