| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3145 |
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| Symbol | |
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| ID | 5748729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3461149 |
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| End bp | 3461844 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298248 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001564168 |
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| Protein GI | 160898586 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00258001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000377263 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCCTG CCCGCATCCT CCTGGTCGAA GACGAGACCG ACATGGCCGC CATCGTCATC
GACTACCTGC GCCATGCCGG CTACGAAGTC GAGCACATCC GCCACGGGCG CGAGGCGCTG
GACCGCATGC TGCGCTCCCC GCCCGACCTC ACCGTGCTGG ACATCATGCT GCCGGGGCTG
GACGGCCTGG ACATCCTGCG CCAGTTCCGC CCCCACAGCG CCAGCCCCGT CATCCTGCTC
ACCGCGCGTG TCGAGGAAAT GGACCGCCTG CTGGGCCTGG AGCTGGGCGC GGACGACTAC
ATCTGCAAAC CCTTCGCACC GCGCGAAGTC GTGGCCCGCG TCAAGGCCGT GCTGCGCCGC
AGTGCCGGCC CCGGCCCTGC CCAGCAACGC CTGACGCTGC TGCCCGAGCA GGGCCGCGCC
ATGCTCAACG GCAGCGTGCT GCCACTGACC AAGCGGGAGC TGACCTTGCT GCAGGCCCTG
ATGCGCCAGC CCGGCCGCCT GTACTCCCGC GCGCAGCTGC TGGAGCTGGC CTGCGCCGAC
ACACTGGACG TGAACGAGCG CGCCATCGAC AGCCACATCA AGAACCTGCG CAAGAAACTC
AAGGCGGCGG ACGACCGCCA TGAGTGGATT CGCTCCGTCT ATGGCGTGGG CTTTGCGTTC
GAGCCCGATG GCGGTTCCGA CACGCGGGCG CAGTGA
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| Protein sequence | MKPARILLVE DETDMAAIVI DYLRHAGYEV EHIRHGREAL DRMLRSPPDL TVLDIMLPGL
DGLDILRQFR PHSASPVILL TARVEEMDRL LGLELGADDY ICKPFAPREV VARVKAVLRR
SAGPGPAQQR LTLLPEQGRA MLNGSVLPLT KRELTLLQAL MRQPGRLYSR AQLLELACAD
TLDVNERAID SHIKNLRKKL KAADDRHEWI RSVYGVGFAF EPDGGSDTRA Q
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