Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3144 |
Symbol | |
ID | 5748728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3459503 |
End bp | 3461152 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641298247 |
Product | histidine kinase |
Protein accession | YP_001564167 |
Protein GI | 160898585 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.808997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00122307 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCTCC GCCTCCCGCG CCTGAAGCTG CAGCACAAGG CCTTCTTCGC CCTGGCCGTG CTGCTGGTGG CCCTGCTGCT GGTGTTTCTC GGTTTCTCCC GCCTGGGCCT GCAGCGGGGC CTGGGCCCGT ACATGGCCGA GGTGGAGCTG ACCGGCATGG ACGGGCTGGC CGAGCGGCTG GTCCAGCACC ATGAGCAAAA CGGCGGCTGG GATGCGGCGC GCGCCAACCC CGGTTTCTGG CGCGACATGG TGCGACCGGG CGCAGGCATG GGCCGGGGCT TTCCTGCGGG CGAGCCCGGG CCACGGCCCC CCATGCCCAT GCCCATGCCC ATGCCGGAGC CGAGGCCTGG TTTTGAGGGA AGCCACGGTC CGGGGCCGGG CCCGGGGTTT CCACCGCCAC CTGGGCCGGA AGGCGGAGAG CGTGCCGATC GCTCAGATCG CTCAGATCGC TCCGACCGTA CAGACCGCCC AGACCGCCCA GGCCCGCCGC CAGACCGCCC GTTCGGCGGC CCGTGGGCGC GCGTGGGCCT GCTGGATGCC CAGGGCCAGC TCATCTCCGG CATGACGCCG CAGCCCGGTG TGGCGCACCG CGTTCTGCGC GCCGCCAACG GGCAGGCCAT TGGCGAGATC GTGCTGTCCC CCGTGCAGAC AGGGCAGGGC ATGCAGCGCG ACCTGGACCG CGCCTTCCTC GCGCAGCAGA TGGGTTTTGT GGCCTGGACC GGGCTGGCCG GCCTGCTGCT GGCGCTGCTG CTGTCGGCCT GGCTCACGCG GCGCTGGCTG GAGCCGCTGA CCGCCTTCGT CGACGGCCTG CGCGGCATTG CGGCCGGGCG GCTGGATACG CGCGTGGCCA TCAAGGGCGA TGCGGAGCTG GCCCGCCTTG CGGAAACCTT CAACGACATG GCCGTGCAGC TGGCCACCAT GGAGGCCTCG CGCCAGCGCT GGCTGGCCGA CGTGGCGCAT GAGCTGCGCA CGCCCCTGTC CACCATGCGC GCCGAGGTCG AGGCCGTGCA GGACGGCGTG CTGCCCATGG ACGACCGCAT GGCGCTGCGC CTGCACCGGC AGATCATGCG GCTGATACGG CTGGTCAGCG ACCTGCGCGT GAGCCTGGAC GACCCGCAGG CCCTGCACGG CTCGGGCCAT GTGCCCGTGC ATGTGCTGAC CCTGCTGGGC GAGGCGCTGG ACGGCGCACG GCCGGGCTTC GAGCAGGTCG GCATCGGCCT GGACCGCTCC ACCGTGGACC AGCTGGCTGC GCGCGTTCCG CCGCCGCTGG TGCAGGGCGA CCCGCACCGG CTGCACCAGG TGTTTGCCAA CCTGCTGGAA AACAGCCTGC GCTACACGGC TGCGGGCGGG CGGCTGCAGG TGTCCGCCGA AATCGTCCAG ATGCAGGACC GCAGCATGCT GCAACTGCGC TGGGACGACA CGGCTCCCGG CGTGGCCAGC CCGCACCTGC CGCGCCTGTT CGACCGCCTC TATCGCGTGG ACGCCTCCCG CGTGCGCGAT GGCGACGGCC TGGGCGGCTC CGGCCTGGGG CTGGCCATCT GCCGCACCAT CGTCCAGGCC CATGGCGGCA GCATCGAGGC CGCTGCCTCG CCGCTGGGCG GCCTGCGCAT CACGCTGTGG CTGCCCTTGC TGGAAAATCC CGCGCCATGA
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Protein sequence | MSLRLPRLKL QHKAFFALAV LLVALLLVFL GFSRLGLQRG LGPYMAEVEL TGMDGLAERL VQHHEQNGGW DAARANPGFW RDMVRPGAGM GRGFPAGEPG PRPPMPMPMP MPEPRPGFEG SHGPGPGPGF PPPPGPEGGE RADRSDRSDR SDRTDRPDRP GPPPDRPFGG PWARVGLLDA QGQLISGMTP QPGVAHRVLR AANGQAIGEI VLSPVQTGQG MQRDLDRAFL AQQMGFVAWT GLAGLLLALL LSAWLTRRWL EPLTAFVDGL RGIAAGRLDT RVAIKGDAEL ARLAETFNDM AVQLATMEAS RQRWLADVAH ELRTPLSTMR AEVEAVQDGV LPMDDRMALR LHRQIMRLIR LVSDLRVSLD DPQALHGSGH VPVHVLTLLG EALDGARPGF EQVGIGLDRS TVDQLAARVP PPLVQGDPHR LHQVFANLLE NSLRYTAAGG RLQVSAEIVQ MQDRSMLQLR WDDTAPGVAS PHLPRLFDRL YRVDASRVRD GDGLGGSGLG LAICRTIVQA HGGSIEAAAS PLGGLRITLW LPLLENPAP
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