| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3138 |
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| Symbol | |
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| ID | 5748722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3454786 |
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| End bp | 3455964 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298241 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001564161 |
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| Protein GI | 160898579 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0152397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCCT TACCTTCCCA CGAGCACACC TGTATGGCCA CCGACCCCCT GCTGCCGCTG
TCCGGCATCC GCGTCATCGA ATTCACCCAC ATGGTCATGG GCCCCACCTG CGGCATGATC
CTGGCCGACC TGGGCGCCGA AGTCATCAAG GTCGAGCCAC CGGGCGGAGA CAAAACGCGC
ACGCTGCCTG GCCTGGGCAT CGGCTTTTTC CGCAGCTTCA ACCGCAACAA GAAAAGCGTG
GTGCTGGACA TCACCACCGA AGCGGGCCGC GCCACCGCTG CCGAACTGGC CGCTGGCAGC
GACGTGGTGC TGGAGAACTT CCGCCCCGGC CTCATGCAGT CCCTGGGCCT GGACCACGCC
ACGCTGTCGC AGCGCGCGCC CGGTCTCATC TACGTCAGCC ACAAGGGCTT TCTGCCCGGC
CCCTACGAGA AGCGCCTGGC GCTGGACGAG GTGGTGCAGA TGATGGGCGG CCTGTCGTAC
ATGACCGGCC CCGTGGGCCG GCCGCTGCGC GCGGGCACCA GCGTCAACGA CATCATGGGC
GGCATGTTCG GCGCCATCGG CGTGCTCGCC GCCCTGCGCG AGCGTGAGCG CACCGGGCGC
GGCCAGGAGG TGCAAAGCGC GCTGTTCGAG AACTGCGTCT TCCTGTCCTC CCAGCACATG
CAGCAGTACC TGATGACGGG CGAGGCACCG CCGCCCATGC CCTCGCGCGT ATCGGCCTGG
AGCGTCTACG ACGTGTTCAC CCTGGCCGGT GGCGAGCAGC TGTTCATCGG CGCCGTCAGC
GACAAGCAGT TCGCCACCCT GTGCCGCGTG CTGGACTGCG CCGACCTGCT GCAGCGCCCC
GAATACGCCG ACAACGCCGC CCGCGTGGCC GTGCGCCCCC AACTGCTGGC CGAGCTGGGC
GCCATCCTGG CCAGCCATGA ATCGGCCCGG CTCGCGCCGC AGCTGGAGGC CGCAGGCATT
CCCTACGCGC CCATCACTCG GCCTGAGCAA CTGGTGGACG ACCCGCACCT GCGCCAAAGC
GGCGGCCTGG CTTCCATGCA GACCGAAGAC GGCGGCCAGA CCGACGTGGT GCTGCTGCCC
CTGCTCATGA ACGGCCACCG TCCCGGCGTG CGCATGCCGC TGGCCGGGAT TGGCGAGCAC
ACCGAAGAAA TCCTCGGAGC CCTTGCATCA CGGACCTGA
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| Protein sequence | MNPLPSHEHT CMATDPLLPL SGIRVIEFTH MVMGPTCGMI LADLGAEVIK VEPPGGDKTR
TLPGLGIGFF RSFNRNKKSV VLDITTEAGR ATAAELAAGS DVVLENFRPG LMQSLGLDHA
TLSQRAPGLI YVSHKGFLPG PYEKRLALDE VVQMMGGLSY MTGPVGRPLR AGTSVNDIMG
GMFGAIGVLA ALRERERTGR GQEVQSALFE NCVFLSSQHM QQYLMTGEAP PPMPSRVSAW
SVYDVFTLAG GEQLFIGAVS DKQFATLCRV LDCADLLQRP EYADNAARVA VRPQLLAELG
AILASHESAR LAPQLEAAGI PYAPITRPEQ LVDDPHLRQS GGLASMQTED GGQTDVVLLP
LLMNGHRPGV RMPLAGIGEH TEEILGALAS RT
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