Gene Daci_3134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3134 
Symbol 
ID5748718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3451287 
End bp3452078 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID641298237 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_001564157 
Protein GI160898575 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.219177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TCAAAGTCCC TTCCCTGCCC GGCGTCGATG GCGAGGCCGT GGTGCGCGAG 
GCACGCTCGC TGATCGTCCG CAAGCTGGAC CAGCCCGCAC GCCGCGCCTT CTTGCAGCGC
TCGCTGACGC TGGGCGGCCT GTCCCTGCTC ACGGGCTGCA GCATCAGCGA TGACAGCCAC
GTCGAGGCCG CGCTCAGCCA GGTATCGCGC TTCAACGACC GCATGCAGGG CCTGCTCTTC
AGCCCCACGC GGCTGGCGCC CACCTATTCC GCAGCCGAGA TCACGCGCCC CTTCCCCTTC
AATGCCTACT ACGGCGAGGA CGAGGTGCGC GAGGTGGACG GGGCCAGCTG GCGCCTGGAG
GTGACCGGCA TGGTCGCCGA CCGCCATGCC TGGACCCTGG CCGAGCTGCG CGCCATGCCG
CAGGACGAAC AGATCACGCG CCATATCTGC GTGGAAGGCT GGAGCGCCAT AGGCCGCTGG
GGCGGCGTGC GCTTTGCCGA TTTCCTGCGC CACATAGGCG CCGACACCAG TGCCAAGTAC
GTCGGCTTCA AGTGCGTTGA CGACTACTTC ACCAGCATCG ACATGGCCAC GGCCCTGCAT
CCGCAGACGC TGATGGCATT GACTTACGAC GGGCAGCCCC TGCCGCCCAA ATATGGCTTT
CCGATGAAGC TGCGCATGCC CACCAAGCTG GGCTACAAGA ACCCGAAGCA CATCCAGGCC
ATGTTCGTCA CCAACACCTA CTCCGGCGGC TACTGGGAAG ACCAGGGCTA CAACTGGTTC
GGAGGCAGCT GA
 
Protein sequence
MKIFKVPSLP GVDGEAVVRE ARSLIVRKLD QPARRAFLQR SLTLGGLSLL TGCSISDDSH 
VEAALSQVSR FNDRMQGLLF SPTRLAPTYS AAEITRPFPF NAYYGEDEVR EVDGASWRLE
VTGMVADRHA WTLAELRAMP QDEQITRHIC VEGWSAIGRW GGVRFADFLR HIGADTSAKY
VGFKCVDDYF TSIDMATALH PQTLMALTYD GQPLPPKYGF PMKLRMPTKL GYKNPKHIQA
MFVTNTYSGG YWEDQGYNWF GGS