| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3128 |
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| Symbol | |
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| ID | 5748712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3445788 |
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| End bp | 3446741 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298231 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001564151 |
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| Protein GI | 160898569 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0702064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.886792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG AAAAGCAGAG CGACGTGACG GCCGCCGTGC TGGAGCAATT GCAGCAGTCA
AGCGATCCCC GCTTCAAGGA GATCATGATC GCCGCAGTCA CCCATCTGCA CGGCTTCATA
CGGGACGCCC GCCTGTCGGA GGCGGAGTTC CACCAGGCCT GCGCCCTCAT CGCCCGGCTG
GGGCAACTGA CCACGGCCTC GCACAACGAG GTGGTGCTCA TTGCCGGCTC GCTGGGCGTC
TCCGCCCTGG TCTGCCTGCT CAACAACGGG GACAACGGCC AGACGGAAAC CACGGCCAAC
CTGATGGGCC CGTTCTGGCG CATGGATTCT CCGCCCACGG AAAACGGCGG CTCCATCGTC
CGCTCTCCCA CGCCGGGCAT GCCCGTGTTC GTGAACGCCT GGGTGCGCGA CCGGCAGGGT
CGGCCCGTGC CGGATGCCGA AGTCGATGTA TGGCATGCGT CGTCCGAGGG CTTCTATGAG
AACCAGGACC CGGAGCAGGC CGACATGAAC CTGCGCGGCA AGTTCAGGAC CGATGCCGCA
GGGTGCATCA CCTTTCGCAC CATCAAGCCC GTGGGCTATC CCATTCCCTT GAGCGGCCCG
GTGGGCGCCC TGCTGCGCGC GCAGGGCCGG CACAACATGC GCCCGGCCCA CATCCACTTC
ATGGTCTACA AGCCCGGCTT CAAGACGCAG TTTGCCCAGG TGTATTCCAG TGACGATCCG
CACCTGGAGA CTGATGTGCA GTTCGGCGTG ACGCGGGCGC TGATCGGACA GTACGTTCTT
CACTCGGGCG AGTCCCCTCC GGCCGACGAC GTGCATGGCG CCTGGTACAC GCTGGACCAC
CATTTCGTGA TCGAGCCAGG GGAGGCTCGG CTGCCCAAGC CCCCGATCAC CGGCAAGGCC
GGCGGGGAGC GCCCGACGCT CACCGTGCTG GAGCGCTGCA CAGACACTCA CTGA
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| Protein sequence | MIIEKQSDVT AAVLEQLQQS SDPRFKEIMI AAVTHLHGFI RDARLSEAEF HQACALIARL
GQLTTASHNE VVLIAGSLGV SALVCLLNNG DNGQTETTAN LMGPFWRMDS PPTENGGSIV
RSPTPGMPVF VNAWVRDRQG RPVPDAEVDV WHASSEGFYE NQDPEQADMN LRGKFRTDAA
GCITFRTIKP VGYPIPLSGP VGALLRAQGR HNMRPAHIHF MVYKPGFKTQ FAQVYSSDDP
HLETDVQFGV TRALIGQYVL HSGESPPADD VHGAWYTLDH HFVIEPGEAR LPKPPITGKA
GGERPTLTVL ERCTDTH
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