| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3126 |
|---|
| Symbol | |
|---|
| ID | 5748710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3443759 |
|---|
| End bp | 3444649 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298229 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001564149 |
|---|
| Protein GI | 160898567 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.211157 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGC GGCATATGCG TTACTTCCTC GCCCTGGCAC AGGAGCAAAG CGTCAGCCGT
GCGGCCGAGC GGCTGCACAT GGCGCAGCCG CCCCTGTCGC GGCAGATGCG CCAGATGGAG
GAGGACCTCG GTGTGGAACT GTTCGTGCGC ACATCCCGGG GCATAGAGCT GACCGAGGCT
GCGCACTCCC TTTTGCGCGA TGTTCCGAAC ATCCTGGAAC TGGCCCGGCT GGCCCGCGAA
CGTGCGCTGC GGGCAGGAAA GGGGCTGCTG GGTGATCTGG ACATCGGCAT CTTCGGCTCG
GGGATGCTGA ACGTCATCCC TCGCCTGATC GGGAGCTTTC ACACGCAGCG GCCCGAGGTC
CGCATCCGGC TTCACAACCT GACCAAGGGC GAGCAGATCC AGGCCTTGCG GGAACACCGG
ATCCAGGTGG GCTTTCACCG GCTGCCCCCG GCCGAGCCCG ACCTGGCCGT GCGCCTGGTG
CTGCGCGAGC CCATGTACGT GGGCATGCAT GAAGGCCATC CGCTCAGCAC ACGCGCCGGG
ATTTCCATTC GCGACCTGGA GCGCCAGCCC ATGATCCTGT ACCCGAACAC GCCGCTGGCG
GGACTGGCGC AGGAGGTGGT GGCAGCGTTT CGCCGCGAAA AAGTGCAGAT CGAGGTCATG
CAGGAGGTGG AGGACGTCAC CACTTGCATC GCCCTGGTCA GCGCAGGCCT GGGGCTGTGC
ATCACGCCCG AATCGGGAAC CATGCTGAGA TTGCCGGGCG TCGTCTTCCG CCCGCTGCGC
TCCCGCTTTC TCAAGGACAT CGAGTTGAGC TGCGTCCACC GCCGGGACGA TACCTCTGCC
CTCCTGGCGG CGTTCATGGA GGTCGTCAGA GACTACCCGG GCAGCGCCTG A
|
|---|
| Protein sequence | MDLRHMRYFL ALAQEQSVSR AAERLHMAQP PLSRQMRQME EDLGVELFVR TSRGIELTEA
AHSLLRDVPN ILELARLARE RALRAGKGLL GDLDIGIFGS GMLNVIPRLI GSFHTQRPEV
RIRLHNLTKG EQIQALREHR IQVGFHRLPP AEPDLAVRLV LREPMYVGMH EGHPLSTRAG
ISIRDLERQP MILYPNTPLA GLAQEVVAAF RREKVQIEVM QEVEDVTTCI ALVSAGLGLC
ITPESGTMLR LPGVVFRPLR SRFLKDIELS CVHRRDDTSA LLAAFMEVVR DYPGSA
|
|---|
| |