Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3117 |
Symbol | |
ID | 5748701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3434440 |
End bp | 3435738 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641298220 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_001564140 |
Protein GI | 160898558 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.459659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCC TTGTTCTTGG CGGCGGTGTC ATCGGCGTGA CCAGTGCGTA CTACCTGGCG CGGGCCGGTG CCGAGGTCAC GGTGCTGGAC CGGCAGGATG CGCCCGCGTC CGAAACCAGC TTTGCCAACG CGGGCCAGGT CTCGCCCGGC TACTCCACGC CCTGGGCGGC GCCCGGCATT CCGCTCAAGG CCCTGAAGTG GATGCTGCAG GAACACGCGC CGCTGGCCGT GCGCCTGGAC GGCAGCCTGT TCCAGCTGCG CTGGATGGCG CAGATGCTGC GCAACTGCTC TGCCCAGCGC TACGCCGTCA ACAAGGAACG CATGATGCGC GTGGCCGAGT ACAGCCGCAG CTGCCTGCAG CAGTTGCGCG CCGACACCGG CATCGCCTAC GAGCAGCGCA CCGGCGGCAC CTTGCAACTG TTCCGCACCC AGGCCCAGCT GGACGCCGTG GAGCGCGACG TGGCCGTGCT GCGCGAATGC GCCGTGCCCT TCGAGCTGCT GGACCGCGAC CAGCTCGCCC AGGTGGAGCC CGCCCTGGCC CAGGCGCGCG ACCGGCTGAC GGGCGGCCTG CGCCTGCCCA AGGACGAGAC CGGCGACTGC CACCGCTTCA CCAATGAATT GGCCCGCATC GCCACCGGCC TGGGCGTGGA GTTGCGCTTC AACCAGAACG TGGATGGCCT GGTGGTCGAA GGCGGCCGCA TTGCCGGCGT GCGTGTGAAT GGCGAACTGC TGACCGCCGA CCGCTACGTG ATGGCCTTCG GCAGCTACTC GCGCCAGGCG CTGGAGCCGC TGGGGCTGGA CCTGCCCGTC TACCCCGTCA AGGGCTATTC GCTCACCGTG CCGCTGGGCA ACCCGGCGCT GGCGCCGCAG TCCACCGTGC TGGACGAGAC CTACAAGATT GCCGTCACCC GCTTTGACGA CCGCATCCGC GTGGGCGGCA TGGCCGAGCT GGGCGGGTTC GACCTGCGCC TGGACCCGCG CCGCCGCGCC ACGCTGGAGC TGGTGGTCAA CGACCTGTTC CCGGGCGGCG ACGTGGCGCG CGCCAGCTTC TGGACCGGGC TGCGGCCCAT GACGCCGGAC GGCACGCCCA TCATCGGCGC CACGCGCTAT GCCAACCTGT TCCTGAACAC CGGCCACGGC ACGCTGGGCT GGACCATGGC CTGCGGCTCG GGCCGGCTGA TCGCCGACCT GATCACCGGC CGCAGCCCGG AAATCAGCAC CGACGGCCTG GCCCTGGACC GCTACACGCA CCGGCCGGCC CGGCACCTGG GGGGCAGCTC CACGCCCGTG TCCGCCTGA
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Protein sequence | MKVLVLGGGV IGVTSAYYLA RAGAEVTVLD RQDAPASETS FANAGQVSPG YSTPWAAPGI PLKALKWMLQ EHAPLAVRLD GSLFQLRWMA QMLRNCSAQR YAVNKERMMR VAEYSRSCLQ QLRADTGIAY EQRTGGTLQL FRTQAQLDAV ERDVAVLREC AVPFELLDRD QLAQVEPALA QARDRLTGGL RLPKDETGDC HRFTNELARI ATGLGVELRF NQNVDGLVVE GGRIAGVRVN GELLTADRYV MAFGSYSRQA LEPLGLDLPV YPVKGYSLTV PLGNPALAPQ STVLDETYKI AVTRFDDRIR VGGMAELGGF DLRLDPRRRA TLELVVNDLF PGGDVARASF WTGLRPMTPD GTPIIGATRY ANLFLNTGHG TLGWTMACGS GRLIADLITG RSPEISTDGL ALDRYTHRPA RHLGGSSTPV SA
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