Gene Daci_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3114 
Symbol 
ID5748698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3430995 
End bp3432017 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content73% 
IMG OID641298217 
Producthypothetical protein 
Protein accessionYP_001564137 
Protein GI160898555 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.2106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCG CACCCCTACC CGCCCCGCAG GCCAGCGGCC GCCTGCCGAC CACCCGCCGC 
CATGCGCTGC GCCCCCTGGC CGCCGCAGCC CTGCTGGCCC TTGCACTGCC CACGGCCCGC
GCGGCCGATC CCCCGGCGCA CGCGCCGCAG GGCAAGCCCA TCACATGGAT CGTGGGCTTT
GCGCCCGGCG GCAGCTTGGA CGTGCTGACC CGCCATGTGG CCCGGCAACT GGAGGCCAGG
GCCGGTGTCA GCGTGGTGGT GGAAAACCGG CCGGGCGCCT CGGGCGCGAT CAGCCTGCAG
GCGGCGGCCA AGGCGCCTGC CGATGGCCTG ACCCTGGTCT CCGTTCCCGG GCCGCAGCTG
TCCGGTCCAC GCCAGCCCGA GGTGGGCCGC GAGCTGACCG CCGTGGCCGT GATGGCCCGG
GGCGCCATGG TGCTGGTGGG CCCGGCCCCG GGTGCGGCCG GCAGCCTGGG CGAACTGGTA
GCCGCCATGA AAGCCAAACC GGGCCAATGG AGCTACGCCA GTTCGGGCAC GGGCACCTCC
CAGCATCTGG CCGGCGAACT GCTCAACGCC CTGGCGGCCA CCAGCATGGT GCATGTGCCG
TACAAGGGTG GCGGGCAGGC CGTGACCGAT GTGGTGGGCG GGCAGATCCC CCTGGCCATG
CTGGGCGTGA CGCCCGTGCT GCCGCACATC CAGTCGGGCC GGCTGAAGGC CTATGCCGTG
ACCAGCGCCA CGCGCATAGA CAGCCTGCCT AATGTACCGA CCATGCGCGA GGCCGGCGTG
CCCGGCTACG AGGCCACCCA GTGGTATGCC GTGGCCGTGC CCTCCGGCAC GCCCCCCGAG
CGGCTGGCCC AGCTCAACCA GTGGATCAAC CAGGCCATCC AGTCGCCCGA GCTGCGCCCC
ACGCTGCAGG CCGCAGGGGC CGTGGCCACG CCCATGTCGC TGCCCGAGAT CCAGCGCTTC
ATGTCCCAGG ACAACGCCAA GTGGAAGAAG CTGGCCGCAG ACCGGCGCCT GGCGCTGGAC
TGA
 
Protein sequence
MTCAPLPAPQ ASGRLPTTRR HALRPLAAAA LLALALPTAR AADPPAHAPQ GKPITWIVGF 
APGGSLDVLT RHVARQLEAR AGVSVVVENR PGASGAISLQ AAAKAPADGL TLVSVPGPQL
SGPRQPEVGR ELTAVAVMAR GAMVLVGPAP GAAGSLGELV AAMKAKPGQW SYASSGTGTS
QHLAGELLNA LAATSMVHVP YKGGGQAVTD VVGGQIPLAM LGVTPVLPHI QSGRLKAYAV
TSATRIDSLP NVPTMREAGV PGYEATQWYA VAVPSGTPPE RLAQLNQWIN QAIQSPELRP
TLQAAGAVAT PMSLPEIQRF MSQDNAKWKK LAADRRLALD