Gene Daci_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3105 
Symbol 
ID5748689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3423428 
End bp3423970 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID641298208 
ProductMarR family transcriptional regulator 
Protein accessionYP_001564128 
Protein GI160898546 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.358207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAC CCACCCTCCC CCGCCTTCCC GACCGGGTAG ACACCATCCT CGAACAATGG 
GCGCGCGAAC GCCCCGACCT GGACGCCAGC CCCATGGGCC CCATCGGCCG TATCAAGCGC
TGCGCAGCCC TACTGGAGCA GCGGCTGGAA GAGTGCTTTG CGCGCTTCGG CATGACCATG
TGGGAATTCG ACGTGCTGGC CACGCTGCGC CGCTCGGGCG CGCCCTTCTG CCTCACGCCC
ACGGCCCTGT TTTCCACGCT CATGGTCACC TCGGGCACCA TGACCCATCG CATGAAAAGC
CTGGAGACGC GCGGCCTGGT GCAGCGTTTG CCCAACCCGC AGGACGCGCG CAGCATGCTG
GTGCAGCTCA CCGACCAGGG GCTGGAGCTG ATAGACCGCG CCGTGGAAGC GCACCTGGAC
AACGAGCGCG CCATGCTGGC GCCCATGCCC GTTGCCGAAC TGGCCGCGCT GGACCAGCGG
CTGTCCCAGC TGCTGCGCGT GCTGGAGGGC GGGCCTGACG AGGGCACCCG CCCTGCCCCC
TGA
 
Protein sequence
MPKPTLPRLP DRVDTILEQW ARERPDLDAS PMGPIGRIKR CAALLEQRLE ECFARFGMTM 
WEFDVLATLR RSGAPFCLTP TALFSTLMVT SGTMTHRMKS LETRGLVQRL PNPQDARSML
VQLTDQGLEL IDRAVEAHLD NERAMLAPMP VAELAALDQR LSQLLRVLEG GPDEGTRPAP