Gene Daci_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3096 
Symbol 
ID5748680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3414557 
End bp3415249 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID641298199 
Producthypothetical protein 
Protein accessionYP_001564119 
Protein GI160898537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.495233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCAT CGTGGTTTCG GACGCTGGCA ACGGCTGCCG CGCTGCTCAC TCCTACGTTG 
GCACCAGCCC AATTCAGTGG CGATTTGGTG CTCTGGCCGA AGGGATGCGA GGCCGCCGGG
CAATGCATCA TCAAGGAGGC TCTGCGTTTC AAAGATGCAT CCGGAACGGT CTGGGAGGCG
AAGGCGGGGC TCAAGACGGA CGGTGCCTCA ATCCCGGGAG TCTTCCAGCC GTTCATCGGG
AGTCCCTTTG AGACAAGGTT CATCAAGGCA GCTGTGATCC ACGATCACTA CTGCGACCGT
CACGTCCGCT CGTGGAGGAT GACGCATCGG GTGTTCTACG ATGCCCTGCT GGACCAGGGT
GTTTCCCAAG CGAAGGCCAA GACCATGTAC TTGGCGGTGT TGGTTGGCGG GCCCAAATGG
ATCAGGCTCA TCGCCGGCAA CGCCTGTGGG AAGAATTGCA TCAACGCGAT GAAGTCGGTC
ACAGGCGACA CGGGGTTTCA GACCCGGCCC GCCGACTACA GCTTGCCGGC ATTGGCTCCA
GCCATGCAAG AGGTCTTAAC CCAGCTGGAA GCCAACCCAA ACGCGCTGAC GCTCGAACAG
ATCGAAGAAC GAGCGCAGCA GCTAATGCCA GGGGACTTCT ACTTTGCCAA CGGTGACACC
TTAGTGGTGA CCGGGGAGGA CGCCATCCAG TGA
 
Protein sequence
MNPSWFRTLA TAAALLTPTL APAQFSGDLV LWPKGCEAAG QCIIKEALRF KDASGTVWEA 
KAGLKTDGAS IPGVFQPFIG SPFETRFIKA AVIHDHYCDR HVRSWRMTHR VFYDALLDQG
VSQAKAKTMY LAVLVGGPKW IRLIAGNACG KNCINAMKSV TGDTGFQTRP ADYSLPALAP
AMQEVLTQLE ANPNALTLEQ IEERAQQLMP GDFYFANGDT LVVTGEDAIQ