Gene Daci_3095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3095 
Symbol 
ID5748679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3413671 
End bp3414096 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content61% 
IMG OID641298198 
Productputative TIS1421-transposase orfA protein 
Protein accessionYP_001564118 
Protein GI160898536 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0214138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTG CCCTCATGGC AAGACGACCC GTTAGCAAAG AACTGTGGCG ACAGCTACAA 
CCCCTGATCC CAGCCTTCGT GCCTTCTGCC AAAGGCGGTG CGCGCAAACT CGCAGTCAGC
GATGAAGCTG CCCTCAACGG CATCTTGTTC GTGCTGCAAA CAGGCATTCC ATGGGAAGAC
CTTCCCCAAT CCCTGGGCTA CGGCAGCGGC ATGACTTGCT GGCGGCGTCT GCGCGACTGG
AATGCCGCTG GTGTCTGGGA GCAGCTGCAC CAAGCCATGC TGACTCGCTT GCGTGAACAT
GACCAAATCG ATTGGAGCCG GGCCAGCATT GATGGCTCCT CAGTACCAAG CCCCCGGGGG
GCCAGGAAAC GGGCCCAAAC CCCACGGACA GAGGCAAGCT CGGCTCCAAG CGGCACATCG
TCGTAG
 
Protein sequence
MLAALMARRP VSKELWRQLQ PLIPAFVPSA KGGARKLAVS DEAALNGILF VLQTGIPWED 
LPQSLGYGSG MTCWRRLRDW NAAGVWEQLH QAMLTRLREH DQIDWSRASI DGSSVPSPRG
ARKRAQTPRT EASSAPSGTS S