Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3080 |
Symbol | |
ID | 5748664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3395806 |
End bp | 3399072 |
Gene Length | 3267 bp |
Protein Length | 1088 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641298183 |
Product | histidine kinase |
Protein accession | YP_001564103 |
Protein GI | 160898521 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0169759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.77184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACT CCCCGTTCAG CAAGATCACA CGCACCACAC GCTGGCAGAA CCGGGTACTG TTTGGAGTGC TTCCCCTTGC GATCTTCCTC ATCGCCGTGC TGCTGTGGGG CTCTGAGAGG ATCTTCGAGC AGGAGCAGGG CCGCCTGGCC TTGAACTTCT CCGCCATCGT CGGCTCGCTG CAGGAGCAGG AGATCTTTCT TCGGCGGCTC AAGGGCCGCA ACGAGTCCTG GAAAGCGCTG CCGGACCAGA GGATAGCCAC CATCGTCGAC GTGCCCGCTC CTGCGCAGGC GGACTACCGC ATGTTCCGTG GCCGCGAGGC CATCGGCGGC ATTCCCTTTT CACTGCAATG CTCTGCGCGC GTGGCCTGCG ACACGCTCCC GGACCGGCTT TTCTCGCTGG GCAGCTCCCT GGCCGCGGGC TATTCCTCCT TCTGGGCAGG CTCCTACTTC CCTGCAGCCG CTGCCTTCTT CACCAAGGAG GACGGGGCGA TCAGCATCGG CGTGCCGGCC ATCGACGTGC CCATCGGCAA CGAGAGCGTC ACGCAGGAAA TGTTCGACAG CACGATTGCC GCCGTCAAGG CGCATCTGCG GGCCAGGGCC GCCGATGCCC GGCCGGGCGC CGGCTCCACG GCGCCGGCGC AGGAGATCGT CTGGTTCCGG TCGCCCCAGT TCCCGGAAAA GATGATCGGC ATGGTCGCCG CCGGCTTTTC AAGCCATATC GATGCCGGCG ACGAAGCCGC CGCAAGCCCG ATCTACGCTG CCATCCTTTT CAGCCGCCAG CGCATCAGCG CCATAGAAAG AACCATCCAT ACGCTGCCCA GGCATCTTTT CTGGCTGGAG CACCGGGATT TCGGCGTGCT CATGGGCACC GGCCCCGTCC CGCAAGTGGA CGAGGCGGGG ATGCGGTACA CGCGCAATGG CCTGATCCTC AAGACCGAAG ATGCCTCCGG CCGGTGGACC GGCTACTACC AGGTGGACTA CGCCACCTTT TTCCAGGGCC GGCTGTTCGC CCCTTCTGCC GGCCTGGTGC TGGCCCTGCT GCTGAGCCTG CTGGCCGGTA TTGCCTATAC CCGCTGGTTC AACCGCAAGG TGATTGCGCC TGCGCAGGAA GCGCAGCGGG TCATCGTCGA GAGCAATCAA TTCAACAGGA CGCTGATCGA AACCGCCCCC GTGGCTGTCT GCCTTGTGGC CTACGGCAGT GGAAAGATCA TCTTCAGCAA CTCGCTGGTG CAGGAGTGGC TGCACTCGGC CGATGGCTAC CTGCGCCCCG GCTCGCCGGA AAACAGGGCG GCGCTGGATG AAATTGTCCA CGCCAGGGCC GCAGGAACCA TGGAGCAACT GGTCACCGCG CAGGGCCGAA CGCTTTACGT GGCCTACGCG CCCACCCGCT ACCTGGGCCA GGATGTGACG CTGTGCGTTT TTGCCGACGT AAGTGCGCGC GCAGAAATCG AGAGCAATCT GGAGCGGGCA AGAATCGCGG CGGACGAGGC CAACGAGGCA AAGTCCACCT TTCTGGCGAC CATGAGCCAC GAGATCCGCA CGCCGCTGTA TGGCGCGCTG GGCACGCTGG AGCTGCTGGG CCTGACCGAG CTCACGCAGC TGCAGCGCAA GTATGTGGAC CGTATCGAAG CCTCCTCGTC CATCTTGCTG CAGATCATCA GCGACATCCT GGACACCAGC AAGATCGAGG CGGACCAGTT GCAACTGGAA AAGGCTCCGT TCAATCCCCG GGAGCTGGTG CAAAACTGCA CCAGCTCCTA TGCCGCCATG GCGCAGCAAA ACGGCCTGCT GCTGTTTTCC TGCGTGGACG CGCAGGTGCC CGAGTCGGTG CTGGGAGACG CGGTGCGCAT CCGCCAGATC CTGGGCAATC TCATCAGCAA TGCCATCAAG TTCACGGAGG CCGGCCATGT GATCGTCCGC CTGCGCAGCG TGCCGGGCAC GGCCTCCCAG GTCCGGCTGG TGTTCGAGGT CTGCGACACG GGCGTGGGCA TAGAGAAATC CCTGCATGGG GAGCTTTTCA CGCCCTTTTA TCTGGTCAAG AACAGCAGCC GCACCGCCCG TGGAGCGGGC CTGGGCCTGT CCATCTGCTG GAGCCTGGCC CGGATGATGT CCAGCTCCAT CGAGGTCTGG AGCGAGCCCG GGCTGGGCAG CCGGTTCTGG TTCGAGCTGG GGCTGGAGAC CGTCGCGCAG GAGGAGGAGC AGGAGGAGGC TCCCGCGCTA CAGGGCGCCC GCATCGCGGT GCGCACCCCC CACCCGGAAC TGACGGACAA CATCTGCGCC TGGCTGCAGC GCTGGGGCGG CCAGGCCCGC GCGGCGGGCG CCGCCCCGGT GGCGGCCCAT GACGATGAGC TGCTGCTGGA CGTCCTGCTG CCGGCGGACA GCCCCGCGCC CGGATGGATG GGGCCGCACC TGAACCTTTC CTCGCCGGAC AACCGGGGCA TCGACGGGCA CAACGTTCTG AGCATCGGCT TGGGCATTGC GCAAGTGCTC GGTGGCGCAC AGCGCTCGGC CGGCTTCGGC TCCGATCTGC CCCTGTTCGA CCTGCGCGTG CTGGTCGCCG AGGACAATCC CGTCAACCAG GTGACGCTGC GCGGCCAGCT CGAGAGCCTG GGCTGCGAAG TCACGGTCGC CGACGACGGC GAGGAGGCGC TGGCGCTGTG GGACATCAGC CCGCACGATC TGGTGCTGAC GGACGTGAAC ATGCCCTACC TCAACGGCTA CGAACTGGCG GAGCGGCTGC GTGCGGAGGG CGTTGCCTGC CCCATCGTCG GCGTGACCGC CAATGCCATG CTGGACGAGG AAAACCGCTG CCTGGATGCC GGCATGAATG CCTGGCTGGT CAAGCCCATC CCGTTGCGCA CGCTGGTCCG CACCCTGGAG AAGTTCGCGC CGAAAAAGCG GCTCCGCCCG GCGCCTGCCC AGGCCGATAC CCCGGTGGGG GATACCCCGC AGCCTGCGGC CCTGTCGGAG CCCAACGTGC TGCAGACGCA CCGGCAGGTC TTCGTGCAGT GCATGAACGA CGACATCGCA ATGCTGGCCC GTGGCCTGGA GGAGCACCGG CCCGACCTGG CCGCGCAGGC GCTGCATCGC ATGCGCGGCG CCTTGCTGCT GGCCAGGATG CAGGAGCTTG CCGCGCGCAC CCAGTCGCTG GAGGACCAGC TCCCGAACGG CACCCGGGAG CCCGGCCTGC AGGCCGCGCT GTCAGTCCTG CTGGCCGACC TCTTGGCCGA CCTTCGCGCC ATGATGGCGC AATTGCCCCA GCCCTAA
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Protein sequence | MPDSPFSKIT RTTRWQNRVL FGVLPLAIFL IAVLLWGSER IFEQEQGRLA LNFSAIVGSL QEQEIFLRRL KGRNESWKAL PDQRIATIVD VPAPAQADYR MFRGREAIGG IPFSLQCSAR VACDTLPDRL FSLGSSLAAG YSSFWAGSYF PAAAAFFTKE DGAISIGVPA IDVPIGNESV TQEMFDSTIA AVKAHLRARA ADARPGAGST APAQEIVWFR SPQFPEKMIG MVAAGFSSHI DAGDEAAASP IYAAILFSRQ RISAIERTIH TLPRHLFWLE HRDFGVLMGT GPVPQVDEAG MRYTRNGLIL KTEDASGRWT GYYQVDYATF FQGRLFAPSA GLVLALLLSL LAGIAYTRWF NRKVIAPAQE AQRVIVESNQ FNRTLIETAP VAVCLVAYGS GKIIFSNSLV QEWLHSADGY LRPGSPENRA ALDEIVHARA AGTMEQLVTA QGRTLYVAYA PTRYLGQDVT LCVFADVSAR AEIESNLERA RIAADEANEA KSTFLATMSH EIRTPLYGAL GTLELLGLTE LTQLQRKYVD RIEASSSILL QIISDILDTS KIEADQLQLE KAPFNPRELV QNCTSSYAAM AQQNGLLLFS CVDAQVPESV LGDAVRIRQI LGNLISNAIK FTEAGHVIVR LRSVPGTASQ VRLVFEVCDT GVGIEKSLHG ELFTPFYLVK NSSRTARGAG LGLSICWSLA RMMSSSIEVW SEPGLGSRFW FELGLETVAQ EEEQEEAPAL QGARIAVRTP HPELTDNICA WLQRWGGQAR AAGAAPVAAH DDELLLDVLL PADSPAPGWM GPHLNLSSPD NRGIDGHNVL SIGLGIAQVL GGAQRSAGFG SDLPLFDLRV LVAEDNPVNQ VTLRGQLESL GCEVTVADDG EEALALWDIS PHDLVLTDVN MPYLNGYELA ERLRAEGVAC PIVGVTANAM LDEENRCLDA GMNAWLVKPI PLRTLVRTLE KFAPKKRLRP APAQADTPVG DTPQPAALSE PNVLQTHRQV FVQCMNDDIA MLARGLEEHR PDLAAQALHR MRGALLLARM QELAARTQSL EDQLPNGTRE PGLQAALSVL LADLLADLRA MMAQLPQP
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