Gene Daci_3070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3070 
Symbol 
ID5748654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3382412 
End bp3382912 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID641298173 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_001564093 
Protein GI160898511 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0196244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.972743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA GACGCCATCT TCTGTGGACT GCAGGCGCCG GCACCACCGC CGTCCTGGCG 
GCCAGCCTGT TCCCGCGCAG CGCACCGGCC GCCGCCTCCA GCGAAATCTT CGAGGTGAGC
TACAGCGACG CCGAGTGGCG TGCCCGGCTC ACGCCCGAGC AGTACCAGAT CCTGCGCAAG
GAAGGCACGG AGCGCGCCGG CACCAGCCCC CTGAACAAGG AGCACCGCGC CGGCACCTTT
GCCTGCGCGG GCTGCGCGCT GCCGCTGTTC TCGTCCAAGA CCAAGTTCGA CAGCGGCACC
GGCTGGCCCA GCTTCTGGCA GCCGCTGGAC AAGGCCGTGG CCACGCGCCA GGACCGCACC
TACGGCATGC TGCGCACCGA GGTGCATTGC CGCCGCTGCG GCGGCCACCT GGGCCATGTC
TTCGACGACG GCCCCAAGCC CACGGGCCTG CGCTACTGCA TGAACGGCCT GTCGCTGACG
TTCACGCCCC AGCCTGCCTG A
 
Protein sequence
MTTRRHLLWT AGAGTTAVLA ASLFPRSAPA AASSEIFEVS YSDAEWRARL TPEQYQILRK 
EGTERAGTSP LNKEHRAGTF ACAGCALPLF SSKTKFDSGT GWPSFWQPLD KAVATRQDRT
YGMLRTEVHC RRCGGHLGHV FDDGPKPTGL RYCMNGLSLT FTPQPA