Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3070 |
Symbol | |
ID | 5748654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3382412 |
End bp | 3382912 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641298173 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_001564093 |
Protein GI | 160898511 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0196244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.972743 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA GACGCCATCT TCTGTGGACT GCAGGCGCCG GCACCACCGC CGTCCTGGCG GCCAGCCTGT TCCCGCGCAG CGCACCGGCC GCCGCCTCCA GCGAAATCTT CGAGGTGAGC TACAGCGACG CCGAGTGGCG TGCCCGGCTC ACGCCCGAGC AGTACCAGAT CCTGCGCAAG GAAGGCACGG AGCGCGCCGG CACCAGCCCC CTGAACAAGG AGCACCGCGC CGGCACCTTT GCCTGCGCGG GCTGCGCGCT GCCGCTGTTC TCGTCCAAGA CCAAGTTCGA CAGCGGCACC GGCTGGCCCA GCTTCTGGCA GCCGCTGGAC AAGGCCGTGG CCACGCGCCA GGACCGCACC TACGGCATGC TGCGCACCGA GGTGCATTGC CGCCGCTGCG GCGGCCACCT GGGCCATGTC TTCGACGACG GCCCCAAGCC CACGGGCCTG CGCTACTGCA TGAACGGCCT GTCGCTGACG TTCACGCCCC AGCCTGCCTG A
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Protein sequence | MTTRRHLLWT AGAGTTAVLA ASLFPRSAPA AASSEIFEVS YSDAEWRARL TPEQYQILRK EGTERAGTSP LNKEHRAGTF ACAGCALPLF SSKTKFDSGT GWPSFWQPLD KAVATRQDRT YGMLRTEVHC RRCGGHLGHV FDDGPKPTGL RYCMNGLSLT FTPQPA
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