| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3057 |
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| Symbol | |
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| ID | 5748641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3364869 |
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| End bp | 3366920 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641298160 |
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| Product | ABC transporter related |
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| Protein accession | YP_001564080 |
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| Protein GI | 160898498 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.696223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0570299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTGCG TAGGCCACGT CGCGGCACAC CATAAGAATG CATTTTCCAT GAACGAATTG
CGTACACGCT TTGCCGTATC GATTCGTGGA ACAAGCCTGC GCGACCTCAT ACGCATGGGA
GAGGTTCTTG GCCTGGGTGC CCGGGCGGTG CGCATGGATC TTCAGGGCTT GACCAAGCTG
ACCCTGCCCT GCATCCTTCA TTGGGACCTG ACCCACTTCG TGGTGCTGAC CAAGGTTTCA
CGCCGCAAGA TCACCATTCA TGACCCGGCC AAGGGCTTGC GCACTTTGCC CCTAAAAGAG
GCCAGCGAGC ATTTCACAGG TTTTGCCTTG GAAATGTGGC CGACACCGGC CTTTCAGCAG
ATCAAGCCGA AGCCACCCAT CAGCTGGCGG GATTTGATGG GTCCCATCAT CGGCCTCAGG
CGCAGCCTGC TTCAATTGCT CTTGCTGGCT GCTGCCCTGC AAGTGGTGGC CCTCATCCTG
CCTTTGTTCA CGCAGTGGTT GATGGACGGC CCCGTCGTTT CTGGCGAGCT TGATCTCATA
GGAGTCATCG CCATCGGCTT TGTACTGTTG ACTGTAGTGC GCACGGTGCT GGAGTGGACA
CGCGGCTGGC TGGGGATCGT TGCTACGTAT CAGCTCGGCA TCCAATGGTC TTCGCGCATC
GCGCGGCACC TGTTCAAGCT TCCGATGCAT TGGTACGAAG TCCGCCACAC CGGTGACGTG
CTGTCGCGCT TCCAGTCTGC CAACAATATC CAGCAGACCG TGACGGGCAA GCTGGTGGAT
ATCGTGCTTG ATGCCCTGTT TGCCATCATC ACCGGGGTCG TGATGTTGAT CTACAGCCCA
CTGCTGGCTG CTGTGGCCGT GTTCACCATC GTGGCCTATG CGGCCATACG CCTGTCCACA
CATGGGGCAT TTCATCGGCT CAGCGACGAA GCGCTGGTTC ATGAAGCAAC AGCACAAAGC
CATTTTCTGG AAAGTCTGCG CGCCATGCAG AGCGTCAAGA TCGCGGGCTT GGAGGCACAT
CGCGCATCCG ACTGGGCCAA CCGCATGGTG CAGGCGTCCA ACAGGCGCAT GCTCAGCAAC
CGTATGACGC TGACCTTCGG GTCGAGCTAC AGCCTGCTGT TTGGCTTGGA AACCGTGGCC
GTGCTTGCGG CAGGTGCGTA CATGACCATC GAGGGCGCAT TGACGGTTGG CATGTTGATG
GCCTTCATTG CCTACAAAAA TGAGTTTTCC TCCAGGATGC AGCGGTTCAT CGACAACATG
ATGTCGATGC GCATGCTGCG GCTGCATGTG GAGAGGCTGT CCGACATCGT GCTGACCGAG
CCTGAAAAGA CCGCAGGCAC CTTACCTGAG CAGTTCGACT CCAGAGGCTG GGCACCGCCT
GAAATCCATC TGGACAAGGT GAGCTTCCGG TACGCCGAAG GCGGTCCATG GGTGTTGAAG
GATATCGACC TGAAGCTGCA TGCAGGGGAA CATGTAGCCA TCGTTGGCCC GACCGGATGC
GGCAAGACGA CACTGGCCAA GATCATCTTG GGCTTGCTGG AGCCGACCTC GGGAACCGTT
CGGGTAGATG GGCAGCCGCT GAGCTACCTT GGCTTGTCGA ACTGGAGGCG GCGCATTGGC
GTCGTGATGC AGGACGATCA GTTGTTCTCT GCAAGCCTCA AGGAAAATAT TGCGGGACTG
GATGGCGTGA TCGACATGGG GCGGGTCCAA GCTGCAGCAC GGGCAGCTTT CATCCATGAC
GATATTCTTG CCATGCCGAT GGGTTACGAC ACGCTCAATG GGGACATGGG CAACACCTTG
TCCGGAGGCC AAAAGCAACG CCTTCTGCTG GCCAGGGCCT TGTACCGTGA ACCCTGTGTG
CTGGTTCTGG ACGAAGCCAC CAGCCACCTG GATGTGGAGC GCGAACAGCA GGTCAACGAA
TCCATTGGCC GACTGCCTGT GACACGTATC ACGATTGCAC ATCGTCCTGA CACGATTGCC
ATGGCTGAGC GCGTGATTGA CATCACACGA TTGCATGCAA GCGCCATTGC CGTGGAGGCA
GCCGTTCCAT GA
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| Protein sequence | MACVGHVAAH HKNAFSMNEL RTRFAVSIRG TSLRDLIRMG EVLGLGARAV RMDLQGLTKL
TLPCILHWDL THFVVLTKVS RRKITIHDPA KGLRTLPLKE ASEHFTGFAL EMWPTPAFQQ
IKPKPPISWR DLMGPIIGLR RSLLQLLLLA AALQVVALIL PLFTQWLMDG PVVSGELDLI
GVIAIGFVLL TVVRTVLEWT RGWLGIVATY QLGIQWSSRI ARHLFKLPMH WYEVRHTGDV
LSRFQSANNI QQTVTGKLVD IVLDALFAII TGVVMLIYSP LLAAVAVFTI VAYAAIRLST
HGAFHRLSDE ALVHEATAQS HFLESLRAMQ SVKIAGLEAH RASDWANRMV QASNRRMLSN
RMTLTFGSSY SLLFGLETVA VLAAGAYMTI EGALTVGMLM AFIAYKNEFS SRMQRFIDNM
MSMRMLRLHV ERLSDIVLTE PEKTAGTLPE QFDSRGWAPP EIHLDKVSFR YAEGGPWVLK
DIDLKLHAGE HVAIVGPTGC GKTTLAKIIL GLLEPTSGTV RVDGQPLSYL GLSNWRRRIG
VVMQDDQLFS ASLKENIAGL DGVIDMGRVQ AAARAAFIHD DILAMPMGYD TLNGDMGNTL
SGGQKQRLLL ARALYREPCV LVLDEATSHL DVEREQQVNE SIGRLPVTRI TIAHRPDTIA
MAERVIDITR LHASAIAVEA AVP
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