Gene Daci_3055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3055 
Symbol 
ID5748639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3362974 
End bp3363390 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content70% 
IMG OID641298158 
Producthypothetical protein 
Protein accessionYP_001564078 
Protein GI160898496 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.170433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACA AGCCCTGCCT GGACCTCCAG GACATCAAGA CCATCGCCCA GGCCGCCGAG 
GCGCATGCCA CGGCGCGCGG CTGGGCCGTC AGCATCGCCA TCGCCGATGA CGGCGGCCAC
CTGCTGTGGC TGCAGCGCCT GGACGGCGCG GCACCGGCCT CGGCCCACAT CGCGCCGGCC
AAGGCCCACG CCGCAGCACT GGGCCGCAAG GAAAGTCGGC TCTATGAGGA AATGATCAAT
GGTGGCCGTA CCGCCTACCT GAGCGTGCCC GCGCTGCAAG GCCTGCTGGA AGGCGGCGTG
CCCATCACCA GTGAGGGCCA CTGCCTGGGC GCCGTGGGCG TCAGCGGGGT GAAGCCGGCC
GAGGATGCGG AGGTGGCGCG GGCGGGGATT GCGGCGCTAC AAGTTCTAAA GGAGTAA
 
Protein sequence
MKHKPCLDLQ DIKTIAQAAE AHATARGWAV SIAIADDGGH LLWLQRLDGA APASAHIAPA 
KAHAAALGRK ESRLYEEMIN GGRTAYLSVP ALQGLLEGGV PITSEGHCLG AVGVSGVKPA
EDAEVARAGI AALQVLKE