Gene Daci_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3049 
Symbol 
ID5748633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3354465 
End bp3355979 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content68% 
IMG OID641298152 
Producthypothetical protein 
Protein accessionYP_001564072 
Protein GI160898490 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.235521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.409974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAAC TCCAATACCT CGCGCACGGC TTCGCGGCCG TCACCACCTG GCAGAACACG 
GGGCTGATGC TCACGGGCAT CCTGCTGGGC ATCGTGGTCG GCGTGCTGCC GGGCCTGGGC
GGCCCCAACG GCGTGGCCAT CCTGCTGCCG CTGACCTTCG GCATGTCGCC CACCTCGGCC
ATCATCCTGC TGTCTTGCAT CTACTGGGGG GCGCTGTTCG GCGGCGCCAT CACCTCGGTG
CTGTTCAACA TCCCGGGCGA GGCCTGGTCG GTGGCCACCA CCTTCGACGG CTATCCCATG
GCCCAGCAGG GCCACGCCGG GGCCGCGCTG ACCACGGCCT TCACGGGCTC GTTCATCGGC
GCCATCTCGG GCGTGATGCT GATCACCTTC CTGGCGCCGG TCGTGGCCTC GTTCGCGCTG
CAGTTCGGGC CGCCGGAGTT CTTTGCGGTC TTCTTCCTGA CGTTCTGCTC CTTCATCGGC
ATGGGCAAGG AGCCCAAGGC AAAGATCGTG GCCGCCATGG CCGTGGGCCT GCTGCTGGCG
GCCGTGGGCA TGGACACCAT CTCGGGCGAC CTGCGCATGA CCTTCGGCTC AACGGAGTTG
CTGCGCGGCT TTGATTTCCT GGTGGTGGTG ATCGGCCTGT TCGGCATCAG CGAGATCCTG
ATGACCATCG AGGAAGGCCT GGCCTTCAAG GGCAAGAAGG CCTCCATCGA CCTCAAGGTG
GTGTTCAGGA CCTGGGCCCA GCTGCCGCGC TACTGGCTGA CCATGCTGCG CTCGGCCCTG
GTGGGCTGCT GGATGGGCGT GACGCCCGGC GGCGCCGTGG CGGCCAGCTT CATGGGCTAC
GGGCTGGCCA AGAAGTTCTC GCGCGACCCC GACAGCTTCG GCAAGGGCAC CCCCGAAGGC
GTGCTCGCCC CCGAGACCGC CGCCCACGCG GCCGGCACCT CGGCCCTGCT GCCCATGCTG
GCCCTGGGCA TTCCGGGCTC GGCCACGGCG GCCGTGCTGC TGGGCGGGCT GATGATCTGG
GGCTTGCAGC CCGGCCCGCT GCTGTTCACC GAGCAAAAGG ACTTCGTCTG GGGCCTGATC
GCCAGCATGT ACCTGGGCAA CATCGCCGGC CTGGTCATCG TCATGGCCAC CGTGCCGCTG
TTCGCCGCCA TCCTGCGCGT GCCGTTTTCC ATCGTCGCGC CCATGATCCT CATGGTCTGC
GCCATCGGCG CCTTCACCGT GCACGGCAAT GCCACGGACA TCTGGCTCAT GCTGGTCTTC
GGCGTGGTCG GCTACGTGTT CAAGAAGCTC GACTATCCGC TGGCGCCCAT GGTGCTGGCC
ATCGTGCTCG GCGACCGCAT GGAAGACGCC TTCCGCCAGA GCATGCTCTC CAGCCAGGGC
GCGCTGGGCA TCTTCTGGCA CAACGGCCTG TCGGGCACCA TCACCACGCT GGCCTTGCTG
ATGCTGGTGT GGCCGCTGCT GGGCAAGTTG CGGGCGATGG CGTTCGGGGC GAGGGCAAGG
GCTGTGGCGG CCTGA
 
Protein sequence
MDELQYLAHG FAAVTTWQNT GLMLTGILLG IVVGVLPGLG GPNGVAILLP LTFGMSPTSA 
IILLSCIYWG ALFGGAITSV LFNIPGEAWS VATTFDGYPM AQQGHAGAAL TTAFTGSFIG
AISGVMLITF LAPVVASFAL QFGPPEFFAV FFLTFCSFIG MGKEPKAKIV AAMAVGLLLA
AVGMDTISGD LRMTFGSTEL LRGFDFLVVV IGLFGISEIL MTIEEGLAFK GKKASIDLKV
VFRTWAQLPR YWLTMLRSAL VGCWMGVTPG GAVAASFMGY GLAKKFSRDP DSFGKGTPEG
VLAPETAAHA AGTSALLPML ALGIPGSATA AVLLGGLMIW GLQPGPLLFT EQKDFVWGLI
ASMYLGNIAG LVIVMATVPL FAAILRVPFS IVAPMILMVC AIGAFTVHGN ATDIWLMLVF
GVVGYVFKKL DYPLAPMVLA IVLGDRMEDA FRQSMLSSQG ALGIFWHNGL SGTITTLALL
MLVWPLLGKL RAMAFGARAR AVAA