Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3045 |
Symbol | |
ID | 5748629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3348909 |
End bp | 3351809 |
Gene Length | 2901 bp |
Protein Length | 966 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641298148 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001564068 |
Protein GI | 160898486 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.279323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.639762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCC GTTCCTCCCA CCCCCTCGCC ACCGCCTGGC TTGCCGCACG GGGCTGGAAG CCCTTTGCCT TCCAGCGCGC CGTGTGGAAG GCGCTGGCCC AGGGCCACAG CGGCCTGCTG CACGCCACCA CAGGCGCAGG CAAGACCTAT GCGGTCTGGC TGGGCGCGCT GCAGGCCTTT GCGCAGGCCT CCAAGGCGCC TGCACAGGCC CCTCTCCAGG CCCCTGCCCA GGCCCCACCC AGCAGGAGGA AACCCGCCGC CGCGCCGCTC ACCGTGCTGT GGATCACGCC CATGCGCGCC CTGGCGGCCG ACACGCTCAA GGCGCTGCAG ACGCCCTTGC AGGCGCTGGC CCAGGACCAT CCCGCGCTGG CGCGCTGGAC CGTGGGCGCA CGCACGGGCG ATACGGGAAG CGCCGAGCGC AGCGCGCAGT CGCGCCAGCT ACCCACCGTG CTGGTCACCA CGCCCGAGAG CCTGTCCCTG CTGCTGGCGC GGGCCGATGC GCGCGAGCTG CTGGGCTCCG TGCGCCTGGT GGTGGCCGAT GAATGGCACG AGCTGCTGGG CAACAAGCGC GGCGTGCAAC TGCAGCTGGC CCTGGCGCGG CTGCGCGGCT GGAGCCCGCA ACTGAGCGTC TGGGGCATGT CGGCCACGCT GGGCAATCTG GACGAAGCCA TGCAGACCCT GCTGGGCCTG GACGACCATG GCCAGCCGCG GCCCGGCGTG CTGGTCCAGG GCCAGGTGGA CAAGCGCCTG GTGGTGGACA CCTTGCTGCC CGACCGGCCC GAGCGCTTTT CCTGGGCCGG CCACCTGGGG CTGGCCATGC TGCCGGCCGT GGTGCGCGAG CTGGAGGCCA CGGCAGGCTC CACCCTGGTC TTTGTGAATG TGCGCTCGCA GGCGGAGCTC TGGTACAAGG CGCTGCTGGA GGCCCGGCCC GACTGGGCCG GCCTGCTGGC CATACACCAT GGCTCTCTGG ACCGGGGTGT GCGCGAATGG GTGGAGGCCG GGCTCAAGGC CGGCACGCTC AAGGCCGTGG TCTGCACCAG CAGCCTGGAC CTGGGCGTGG ACTTCCTGCC CGTGGAGCGC GTGCTGCAGA TCGGCTCGGC CAAGGGCATT GCGCGGCTGC TGCAGCGCGC GGGCCGCTCG GGCCATGCGC CGGGCCGGCC CTCGCGCATC ACCCTGGTGC CCACGCACAG CCTGGAGCTG GTGGAGGCCG CCGCCGCCCG CGCCGCCGTG CGCGCGCAGC AGGTGGAAAT GCGCGCCAGC CCCCGCCAGC CCGTGGACGT GCTGGTGCAG CACCTGGCCA CCGTGGCCCT GGGCGGCGGC TTCGTGCCCG ATGAGCTGTA TGCGGAAGTG CGCCGCACCG TTGCCTACGC CGGGCTGGCG CCTGCGGTCT GGCAGTGGTG CCTGGACTTC GTGCACCGGG GCGGCCCCTC GCTGGCCGCC TATCCCGACT ACCAGCGCGT GCGGCCCGAC GCGGAGGGCA TCTGGCGCAT GCCCGACGCG CGGCTGGCGC GCAGGCACCG CGCCAACATC GGCACCATCG TCAGCGACGC CAGCATGAGC GTGCAGATCC TGCATGGCGC GCGGCTGGGC AGCATGGAAG AGAGCTTTCT GTCGCGCCTG TCGCCCGGCG ATGCCTTTGT CTTCGCGGGC CAGGTGCTGG AGCTGGTGCG CATCGAGGAC ATGACCGCCT ACGTGCGCCG CGCCGCCAGA ACGCGGCCCA CCGTGCCGCG CTGGGCGGGC GCGCGCATGC CGCTGTCCAC CGTGCTGGCC GACTTCGTGG TGCAGCAATT GGCGCTGGCG GCAGCGGGCG ACTACCACTC GCCCGAGCTG CGCTGCGTGC GCTCCCTGCT GGAGGTGCAG CAGCGCTGGT CGGCCCTGCC CACGCCCGGC ACGCTGCTGG CCGAAACCCT GCGCACGCGC GAAGGCTGGC ATCTCTTCCT CTACCCGTTT GCGGGCCGCC ATGCCCATAC GGGGCTGGCC AGCCTGCTGG CCTGGCGTGC CGCGCAGGGC GAGATGGGCA CCTTCTCCAT CGCCGTCAAC GACTACGGGC TGGAGCTGCT GAGCGCCACC GAGCGTGACT GGGCCGCCAT GCTGCCCGAA CTGCTGCGCG CCGAGCCGGT GCAGGCCGTG GCGGCGCCCG GACGTGTCTC TGCCACGGAG GCGGGCGCCA TGCGCAATAC CGCCAATGCC GACCGCCACT GGGACCAGGC CGCCGAGGAT GCCCACCTGG CGGGCGATGA CGCCCGCCAC GCCCTGCTGC ACGAAGTGCT GGCCAGCCTC AACGCCACCG AGATGGCAAG GCGGCGCTTC CGCGAGATCG CCCGCGTCTC GGGCCTGATC TTCCAGAGCC ACCCGGGCGA GCGCCGCAGC GCGCGCCAGC TGCAGGCCTC GGCCCAGCTG TTCTTCGAGG TCTTTCGCAA GTACGACGAC ATGAACCTGC TGCTGCGTCA GGCCGATGAG GAAGTCCTGA GCCAGGAGCT GGACGTGGCC CAGCTGCTGG CCGCGCTGCG CCGCATGCAG GCGCAGCAGC TGGTGGTGAG CGCACTGCGC CGTCCCAGCC CGTTTGCCTT TCCGCTGATG GTGGAGCGCT TTCGCGAAAA GCTCACCAAC GAGCACCTGG CCGACCGCAT CGCGCGCATG CTGGCCCAGC TGCACGAGGC GGCAGACGCC GGCGGTGCAG CCAGCGAGCC GCGCACGCAG GACCTGGTCC CGCCCGATCC GCCGCTGCGT CCACGGAAAA AACCCAAGGC AGACCAGCCC CCCGCCGTGG ACGAGGACAC GGCCGCCGTG CGCCGTACGC TGGATTTCTC GCTGCAGGCC ACCGATGGCC CCGAGGCCGA TGCCGCCAGC CGCCGCCCGC GCCGCGTACG CAAGCCCTCG CGGCCCTTGC CGCTGCTGTA G
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Protein sequence | MATRSSHPLA TAWLAARGWK PFAFQRAVWK ALAQGHSGLL HATTGAGKTY AVWLGALQAF AQASKAPAQA PLQAPAQAPP SRRKPAAAPL TVLWITPMRA LAADTLKALQ TPLQALAQDH PALARWTVGA RTGDTGSAER SAQSRQLPTV LVTTPESLSL LLARADAREL LGSVRLVVAD EWHELLGNKR GVQLQLALAR LRGWSPQLSV WGMSATLGNL DEAMQTLLGL DDHGQPRPGV LVQGQVDKRL VVDTLLPDRP ERFSWAGHLG LAMLPAVVRE LEATAGSTLV FVNVRSQAEL WYKALLEARP DWAGLLAIHH GSLDRGVREW VEAGLKAGTL KAVVCTSSLD LGVDFLPVER VLQIGSAKGI ARLLQRAGRS GHAPGRPSRI TLVPTHSLEL VEAAAARAAV RAQQVEMRAS PRQPVDVLVQ HLATVALGGG FVPDELYAEV RRTVAYAGLA PAVWQWCLDF VHRGGPSLAA YPDYQRVRPD AEGIWRMPDA RLARRHRANI GTIVSDASMS VQILHGARLG SMEESFLSRL SPGDAFVFAG QVLELVRIED MTAYVRRAAR TRPTVPRWAG ARMPLSTVLA DFVVQQLALA AAGDYHSPEL RCVRSLLEVQ QRWSALPTPG TLLAETLRTR EGWHLFLYPF AGRHAHTGLA SLLAWRAAQG EMGTFSIAVN DYGLELLSAT ERDWAAMLPE LLRAEPVQAV AAPGRVSATE AGAMRNTANA DRHWDQAAED AHLAGDDARH ALLHEVLASL NATEMARRRF REIARVSGLI FQSHPGERRS ARQLQASAQL FFEVFRKYDD MNLLLRQADE EVLSQELDVA QLLAALRRMQ AQQLVVSALR RPSPFAFPLM VERFREKLTN EHLADRIARM LAQLHEAADA GGAASEPRTQ DLVPPDPPLR PRKKPKADQP PAVDEDTAAV RRTLDFSLQA TDGPEADAAS RRPRRVRKPS RPLPLL
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