| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3043 |
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| Symbol | |
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| ID | 5748627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3346125 |
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| End bp | 3347165 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298146 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_001564066 |
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| Protein GI | 160898484 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0285628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.582199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG ACCTGATCGT GGCCCGCCCC GAAGGCCTGT ACTGCGCGGC CGGCGACTTC
TACATCGACC CCTGGCGGCC CGTGGACCGG GCCGTGATCA CGCATGGCCA CTCCGACCAC
GCGCGCGCCG GCCACGCCCA TTACCTGGCC CATGACGACA GCGAGGGCGT GCTGCGCGCA
CGGCTGGGGG CGGACATCAC GCTGCAGACC CTGCCGTATG GCGAAGCCAT CGATCACCAC
GGCGTGCGCA TCTCCCTGCA CCCGGCCGGC CATGTGCTCG GATCGGCCCA GGTGCGGCTG
GAGCATGGCG GCCAGGTCTG GGTGGCCTCG GGCGACTACA AGACCGAGGC CGACGGCACC
TGCACCCCCT TCGAGCCCGT GCGCTGCGAC ACCTTCATCA CCGAATCCAC CTTCGGCCTG
CCCATCTACC GCTGGCCCCG CCAGCCCGAG CTCATGGCCG ACATCAACGC CTGGTGGCAA
GCCAATGCGG CCCAAGGCCG GCCCTCGGTG CTGCTGTGCT ATGCCTTCGG CAAGGCCCAG
CGCATCCTGC ATGGGGTGGA CCGCCGCATC GGCCCCATCG TCGTGCATGG CGCGGTGGAG
CCGCTCAATG CCGTGTACCG CGCCGCGGGC GTGGACCTGC CGCCCACGCT GCGCGTGACC
GACCCCGGCG TGGATGCACA ACGGCTCAAG ACCGCCCTGG TGCTGGCGCC GCCTTCGGCG
CAGGGCACGC CGTGGATGCG CCGGTTTCCC GGCCATGCCG ATGCCTTTGC CAGCGGCTGG
ATGCAGCTGC GCGGCACGCG CCGGCGCCGT GGCGTGGACC GGGGCTTTGT CATGTCCGAC
CATGCCGACT GGCCCGGCCT GCAGTACGCC ATAGGCGCCA CGGGCGCCGA GCGTGTCTTC
GTCACGCATG GCAGCGTGGC GGTGCTGGTG CGCTGGCTGC GCGAGCAGGG CCTGGATGCG
CAAGCCTTCC AGACCGAATA CGGCGATGAG GACGAGGCTG CCGCAGCCCA GGCTGCACCG
GATGAGACGC CCGCGCCATG A
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| Protein sequence | MAADLIVARP EGLYCAAGDF YIDPWRPVDR AVITHGHSDH ARAGHAHYLA HDDSEGVLRA
RLGADITLQT LPYGEAIDHH GVRISLHPAG HVLGSAQVRL EHGGQVWVAS GDYKTEADGT
CTPFEPVRCD TFITESTFGL PIYRWPRQPE LMADINAWWQ ANAAQGRPSV LLCYAFGKAQ
RILHGVDRRI GPIVVHGAVE PLNAVYRAAG VDLPPTLRVT DPGVDAQRLK TALVLAPPSA
QGTPWMRRFP GHADAFASGW MQLRGTRRRR GVDRGFVMSD HADWPGLQYA IGATGAERVF
VTHGSVAVLV RWLREQGLDA QAFQTEYGDE DEAAAAQAAP DETPAP
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