| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3031 |
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| Symbol | |
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| ID | 5748615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3334541 |
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| End bp | 3334975 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641298134 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001564054 |
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| Protein GI | 160898472 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00544929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.808496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCACCC ATACCCGCAT CCGCATGTTC AACACCAAGG ACACCTATCC CAACCAGTCG
CTGGACAACG ACCTGTGCCA GGCCGTGCGC GCCGGCAACA CCGTCTATGT GCGCGGCCAG
ATCGGCACCG ATTTCGAGGG CAACCTGGTC GGCCTGGGCG ATCCGCAAAA GCAGGCCGAG
CAGGCGATGA AGAACGTCAA GCAGCTGCTG GAGGAAGCGG GCAGCGACCT GTCGCACATC
GTCAAGACCA CCACCTACAT CATCGACCCG CGCTACCGCG AGCCCGTCTA CCGTGAAGTG
GGCAAGTGGC TCAAGGGCGT GTTTCCCATC TCCACGGGGC TGTGCATCTC GGCCCTGGGG
CAGCCGCAGT GGCTGATGGA GATCGACGTG ATCGCGGTCA TCCCCGATGA CTGGCAGCCG
CCGGCCAGCG CCTGA
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| Protein sequence | MPTHTRIRMF NTKDTYPNQS LDNDLCQAVR AGNTVYVRGQ IGTDFEGNLV GLGDPQKQAE
QAMKNVKQLL EEAGSDLSHI VKTTTYIIDP RYREPVYREV GKWLKGVFPI STGLCISALG
QPQWLMEIDV IAVIPDDWQP PASA
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