Gene Daci_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3030 
Symbol 
ID5748614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3333204 
End bp3334487 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content70% 
IMG OID641298133 
Producthypothetical protein 
Protein accessionYP_001564053 
Protein GI160898471 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.101073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.976263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTG ACATTCAAAC CATCAACACG CTCGTGGTCG GCGCCGGGCA GGCCGGCATC 
GCGGCCAGCG AACACCTGGG CCAGCTTGGC GTAGAGCACC TGGTGCTGGA GCGCCAGCGC
ATCGCCCAGG CCTGGCGCAC GGGGCGCTGG GACTCGCTGG TGGCCAACGG GCCGGCCTGG
CATGACCGCT TTCCGGGCCT GGAGTTCAAA GGCGACCGCG ACGGCTTTCC CGGCAAGGAC
GAGGTGGCCG ACTACTTCGA GGACTATGTC CGTCAGATCA AGGCGCCCGT GCGCACCGGC
GTGGAGGTCA GGCGGGTCAC GCGCAACCAG GGCCGGCCGG GCTTCACGGT GCAAACGTCC
GAGGGCGTGA TCGAGGCCCG CAACGTGATC GCGGCCACGG GGCCGTTCCA GGTGCCGGTG
ATCCCGCCGA TAGCGCCGGC TGCGCCCGCT GCACCCGCCG ATGGCAGCCT GCTGCAGATC
CATTCCGCGC ACTACCACCG CCCCGCGCAG TTGCCCGAAG GCGCCGTGCT GGTGGTGGGC
GCAGGCTCCT CGGGCGTGCA GATCGCCGAT GAACTGCAGC GCGCGGGCCG CAAGGTGTTC
CTGTCGGTAG GCGCCCATGA CCGGCCGCCG CGCGCCTACC GCGGCCGTGA TTTCTGCTGG
TGGCTGGGCG TGCTGGGCGA ATGGGATGCG GCCATTGCCA AGCCCGGCCG CGAGCATGTG
ACCATTGCCG TCAGCGGCGC GCGCGGGGGC CACACCGTGG ACTTTCGCGC GCTGGGACAC
CAGGGCATCA CCCTGGTGGG GCTGACCGAG TCCTTCGCCG ATGGCAGGGT GCGCTTCCGG
GACGACCTGG CCGAGAACAT CGCCAACGGC GACGCCAACT ACTTGGCCAT GCTCGATGCG
GCCGACGACT ACATCCGCCG CAACGGCCTG GACCTGCCCG AAGAGCCCGA GGCGCGCAGG
CGCCTGCCCG ATCCGGAGTG CGTGCGCCAG CCCCTGCGCG AACTCGACCT GGCCGCCGCA
GGCATCACTT CCATCATCTG GGCCACGGGC TACAGGGTGG ATTTCAGCTG GCTGCAGGTG
GACAGCTTCG AGCCCGGCGG CAAGCCGCGC CACCACCGCG GCGTGGGCCA CGAGCCCGGC
ATCTACTTCC TGGGCCTGCC CTGGCTGTCG CGCCGTGGCT CGTCCTTCAT CTGGGGCGTG
TGGCATGACG CCAAGTTCGT GGCCGACCAC ATCGCCAAGC AGCGCCGCTA CAGCGACTAC
GACGCCGCCG CCCGCAGCAG GTAG
 
Protein sequence
MTADIQTINT LVVGAGQAGI AASEHLGQLG VEHLVLERQR IAQAWRTGRW DSLVANGPAW 
HDRFPGLEFK GDRDGFPGKD EVADYFEDYV RQIKAPVRTG VEVRRVTRNQ GRPGFTVQTS
EGVIEARNVI AATGPFQVPV IPPIAPAAPA APADGSLLQI HSAHYHRPAQ LPEGAVLVVG
AGSSGVQIAD ELQRAGRKVF LSVGAHDRPP RAYRGRDFCW WLGVLGEWDA AIAKPGREHV
TIAVSGARGG HTVDFRALGH QGITLVGLTE SFADGRVRFR DDLAENIANG DANYLAMLDA
ADDYIRRNGL DLPEEPEARR RLPDPECVRQ PLRELDLAAA GITSIIWATG YRVDFSWLQV
DSFEPGGKPR HHRGVGHEPG IYFLGLPWLS RRGSSFIWGV WHDAKFVADH IAKQRRYSDY
DAAARSR