Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3027 |
Symbol | |
ID | 5748611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3330390 |
End bp | 3331571 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298130 |
Product | inner-membrane translocator |
Protein accession | YP_001564050 |
Protein GI | 160898468 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.56847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.739943 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAA CGACGATACA GGCGCCGCCG CGGGCGGCCC CACGGAGTGC GGGCTCGGCC GCCATCGTGC TGGGAGTGGC CCTGGCGGGC GCCGTGCTGC TGCGCCAATT CCTGCTGGCC GAAAGCTGGA TCACGGTGCT GGCGCTGCTG GCCTGCTTTG CCGTGGCCCT GGTCGCGGTG CAGAAACGCC CGCTGGTGGA AGACCGCATC GTGGCCGCCT TCGGCCAGTG CAGGCCGCTG GCCGTGGGCA CGGGCGTGGT GCTGGCGCTG GTGTTTCCGT GGGTGCTGGG CGGTGACAGC TACGCCATGC ACCTGATGAT CATCGCCTGC CTGTACGCGG TGCTGGCGCT GGCGCTGAAT TTCCAGCTGG GCAGCGCCAA CATACCGAAC TTCGCCACCG GCGCGTCCTA CGGCATCGGC GCCTATGCGT CGGCCCTGCT GGCCATCCAC TTCGGCGTGA GCTTCTGGAT CTGCCTGCTG GTGGCCGCCG CCGTGGCCAC GGTCTTCGGC TTTTTGCTGG GCCTGCCGTC CATGCGCACC CGCGACAGCT ACCAGGCGCT GGTGACGATC GCCTTCGGCA TCGTCGTGCA CCAGCTGCTG ATGAACCTGG AGTGGACGGG CGGCGCCAAC GGCCTGGTGG GCATTCCTTC GCCCACATTG TTCGGCCATT CGTTCAACGA CCCCATCACG CTGTGGGGCC ACAGCCTGCC GGGCCAGGCC AACTTCTACT ACGTGGCCGT CGCCCTGCTG GGGCTGGCCA TCGTCTCGGC GCAGCGCCTG CACAGCTCGC GCGTGGGACT GGCCTGGAAT GCCCTGCGCG ACGACGAGAT CGCCGCACGC GCCTGCGGTA TCAATGTCAC CTGGTTCAAG GTCAAGGCCT TTGCGGTGGA CGCCTTCCTG GCGGGCTTCG CGGGCACGGT GTATGCGTTC TATGTGAGCT TCATCTCGCC GGACAACTTC ACCTTCCTGG TGTCGGTGAC CATCATGACG CTGGTGATCG CAGGCGGCAT GGACAACACG CTGGGCGTGA TCGTCGGCGC CTTCCTGCTG ACCATGCTGC CGGAGAAGCT GCGGGCGTTT TCCGACTACC GCATCCTGTT CTACGGCCTG GTGGTGATCG CCTTCCTCAT CATCCGCCCG CGCGGCATCT TCCCCCAACG GGTGCGCAAC CATGAGCATT GA
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Protein sequence | MQTTTIQAPP RAAPRSAGSA AIVLGVALAG AVLLRQFLLA ESWITVLALL ACFAVALVAV QKRPLVEDRI VAAFGQCRPL AVGTGVVLAL VFPWVLGGDS YAMHLMIIAC LYAVLALALN FQLGSANIPN FATGASYGIG AYASALLAIH FGVSFWICLL VAAAVATVFG FLLGLPSMRT RDSYQALVTI AFGIVVHQLL MNLEWTGGAN GLVGIPSPTL FGHSFNDPIT LWGHSLPGQA NFYYVAVALL GLAIVSAQRL HSSRVGLAWN ALRDDEIAAR ACGINVTWFK VKAFAVDAFL AGFAGTVYAF YVSFISPDNF TFLVSVTIMT LVIAGGMDNT LGVIVGAFLL TMLPEKLRAF SDYRILFYGL VVIAFLIIRP RGIFPQRVRN HEH
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