| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3013 |
|---|
| Symbol | guaA |
|---|
| ID | 5748597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3315780 |
|---|
| End bp | 3317402 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298116 |
|---|
| Product | GMP synthase |
|---|
| Protein accession | YP_001564036 |
|---|
| Protein GI | 160898454 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit |
|---|
| TIGRFAM ID | [TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC AACACGACAA GATCCTCATT CTTGACTTCG GCTCCCAAGT CACCCAGCTG
ATCGCCCGCC GCGTGCGCGA AGCCCATGTC TACTGCGAAG TCCACCCCTG CGACGTCAGC
AGCGACTGGG TGCGCGAATT CGCCGCCGAC GGTCGCCTCA AGGGCGTGAT CCTGTCGGGC
AGCCACGCCA GCGTCTATGA AGTGGACGAC CGCGCCCCCG ACGCCGTGTT CGAGCTGGGC
ATTCCCGTGC TGGGCATCTG CTACGGCATG CAGGCCATGG CCACCCAGCT GGGCGGCAAG
GTCGAAGGCT CGCACACCCG CGAATTCGGC TACGCCGAAG TGCGCGCCCA TGGCCACACC
GAACTGCTCA AGGGCATCCA GGACTTCGCC ACGGCCGAAG GCCACGGCAT GCTCAAGGTC
TGGATGAGCC ACGGCGACAA GGTCACCGAG CTGCCCCCGG GCTTCAAGGT CATGGCCTCC
ACGCCGTCCT GCCCCATCGC CGGCATGGCC GACGAGGCGC GCCGCTTCTA CGCGGTCCAG
TTCCACCCCG AAGTCACGCA CACCGTGCAG GGCGCGGCCC TGCTAAACCG CTTCGTGCGC
GAGATCTGTG CGGCCAACGC CGACTGGATC ATGGGCGACT ACATCGAGGA AGCCGTCGCC
AAGATCCGCG AGCAGGTGGG TGACGAGGAA GTCATCCTCG GCCTGTCGGG CGGCGTGGAT
TCGTCCGTGG CCGCGGCCCT GATCCACCGC GCCATCGGCG ACCAGCTGAC CTGCGTCTTC
GTGGACCACG GCCTGCTGCG CCTGAACGAA GGCGACATGG TCATGGAAAT GTTCGAGGGC
AAGCTGCACG CCAAGGTCAT CCGCGTGGAC GCCAGCGACC TGTTCCTGGG CAAGCTGGCC
GGCGTCAGCG AGCCCGAGGC CAAGCGCAAG ATCATCGGTG GCCTGTTCGT GGACGTGTTC
AAGGCCGAGG CCGCCAAGCT CAAGGCAGGC GACGGTGGCC ACAAGGGCGC CACCTTCCTG
GCCCAGGGCA CCATCTACCC CGACGTCATC GAGTCGGGCG GTGCCAAGAG CAAGAAGGCC
GTCACCATCA AGAGCCACCA CAACGTCGGC GGCCTGCCCG AGCAGCTCGG CCTGAAGCTG
CTCGAACCCC TGCGCGACCT GTTCAAGGAC GAAGTGCGCG AACTCGGCGT GGCCCTGGGC
CTGCCGCGCG AAATGGTCTA CCGCCACCCC TTCCCGGGCC CGGGCCTGGG CGTGCGCATC
CTGGGCGAAG TCAAGAAGGA ATACGCCGAC CTGCTGCGCC GCGCCGACGC CATCTTCATC
GAGGAACTGC GCAACTGGAC CGACGAAGCC ACCGGCAAGA ACTGGTACGA CCTCACCAGC
CAGGCCTTCA CCGTCTTCCT GCCCGTCAAG AGCGTGGGCG TCATGGGCGA CGGCCGCACC
TACGACTACG TCGTGGCCCT GCGCGCCGTG CAGACCAGCG ACTTCATGAC CGCCGACTGG
GCCGAGCTGC CCTACGGCCT GCTCAAGAAG GTGTCTGGCC GGATCATCAA CGAAGTGCGC
GGCATCAACC GGGTGACCTA CGACGTTTCG ACCAAGCCGC CGGCGACGAT CGAGTGGGAA
TGA
|
|---|
| Protein sequence | MTMQHDKILI LDFGSQVTQL IARRVREAHV YCEVHPCDVS SDWVREFAAD GRLKGVILSG
SHASVYEVDD RAPDAVFELG IPVLGICYGM QAMATQLGGK VEGSHTREFG YAEVRAHGHT
ELLKGIQDFA TAEGHGMLKV WMSHGDKVTE LPPGFKVMAS TPSCPIAGMA DEARRFYAVQ
FHPEVTHTVQ GAALLNRFVR EICAANADWI MGDYIEEAVA KIREQVGDEE VILGLSGGVD
SSVAAALIHR AIGDQLTCVF VDHGLLRLNE GDMVMEMFEG KLHAKVIRVD ASDLFLGKLA
GVSEPEAKRK IIGGLFVDVF KAEAAKLKAG DGGHKGATFL AQGTIYPDVI ESGGAKSKKA
VTIKSHHNVG GLPEQLGLKL LEPLRDLFKD EVRELGVALG LPREMVYRHP FPGPGLGVRI
LGEVKKEYAD LLRRADAIFI EELRNWTDEA TGKNWYDLTS QAFTVFLPVK SVGVMGDGRT
YDYVVALRAV QTSDFMTADW AELPYGLLKK VSGRIINEVR GINRVTYDVS TKPPATIEWE
|
|---|
| |