| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3009 |
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| Symbol | |
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| ID | 5748593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3312187 |
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| End bp | 3313881 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298112 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001564032 |
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| Protein GI | 160898450 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0313714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCGC CGAACCAGAT CAACCGCCGA AGCTCCCACA TCACCGAAGG CAAGGCGCGC
GCAGCCAACC GCTCCATGTT CTACGGCATG GGCTACAAGG AAGAGGATTT CAAGAAGCCC
ATGGTCGGCG TGGCCAACGG CCACAGCACG ATCACGCCGT GCAACTCCGG CCTGCAAAGG
CTGGCGGACG CGGCCATCGC AGGCATCGAG GAAGCCGGCG GCAACGCGCA GGTGTTCGGC
ACGCCGACCA TCTCGGACGG CATGTCCATG GGCACGGAAG GCATGAAGTA CTCGCTGGTC
AGCCGCGAGG TGATCGCCGA CTGCATAGAG ACCTGCGTGG GCGGCCAGTG GATGGACGGC
GTGCTAGTGG TCGGCGGCTG CGACAAGAAC ATGCCGGGCG GCATGATGGG CATGCTGCGC
GCCAATGTGC CGGCCATCTA CGTCTACGGC GGCACCATCC TGCCCGGCAG GTGGAAAGGC
CGGGACCTGA ACATCGTCAG CGTGTTCGAG GCCGTCGGCG AAAACGCCGC GGGAAAGATC
AGCGACCAGG AGCTCAAGGA CATCGAGCAG CACGCCATTC CCGGCACGGG CTCGTGCGGC
GGCATGTACA CCGCCAACAC CATGTCGAGC GCGTTCGAGG CGCTGGGCAT GAGCCTGCCC
TACTCCTCCA CCATGGCCAA TCCCCATGAT GAAAAGGAAA ACTCGGCCAA GGAATCCGCC
AGGGTGCTGA TCGAGGCCAT CAAGATGGAC CTCAAGCCGC GCGATATCGT GACGCGCAAG
TCCATCGAGA ACGCGGTCTC GGTGATCATG GCGACCGGGG GCTCCACCAA TGCCGTGCTG
CACTTTCTTG CGATCGCCCA TGCGGCCGGC GTGCCCTGGT CCATCGACGA CTTCGAGCGC
ATCCGCCAGC GGGTGCCGGT GCTGTGCGAT CTCAAGCCCA GCGGCAGATA CCTGGCGGTG
GACCTGCACC AGGCGGGCGG CATCCCGCAG GTCATGAAGA TCCTGCTGAA TGCGGGCCTG
CTGCACGGCG ACTGCATCAC CATCTCGGGC CAGACCATTG CGCAGACCCT GGCTGGCGTG
CCTGACGAAC CACCGAACCC GCAGATCATC CGCCCCCTCT CGGATGCACT CTATCCGCAG
GGCCACCTGG CCATTCTCAA GGGCAACCTG AGCCCGGAAG GCGCGGTGGC CAAGATCACG
GGCCTGAAGA ACCCGGTCAT CACCGGCCCG GCACGCGTGT TCGACGATGA GCAATCGGCA
CTGGCGGCCA TCCTCGACGG CAGGATACAG GCCGGCGATG TGATGGTGCT GCGCTACCTG
GGCCCCAAGG GCGGCCCCGG CATGCCGGAA ATGCTGGCCC CCACGGGCGC CCTGATCGGC
GCCGGCCTGG GCGAGAGCGT GGGCCTGATC ACCGATGGCC GCTTCTCCGG CGGCACCTGG
GGCATGGTGG TCGGCCACGT GGCGCCGGAA GCGGCCGTGG GCGGCACCAT CGCGCTGGTG
CACGAGGGCG ACTCGATCAC CATCGACGCG CACGCATTGC GGCTGCAGCT GAACGTGCCC
GAAGACGTGC TCGCCCAGCG CCGCGCGGCA TGGAAGGCCC CCGCGCCCCG CTACACGCGG
GGCGTGCAGG CCAAGTTCGC TTTCAACGCA TCGAGCGCCA GCTCGGGCGC GGTGCTGGAC
AACTTCGCCA TCTGA
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| Protein sequence | MTPPNQINRR SSHITEGKAR AANRSMFYGM GYKEEDFKKP MVGVANGHST ITPCNSGLQR
LADAAIAGIE EAGGNAQVFG TPTISDGMSM GTEGMKYSLV SREVIADCIE TCVGGQWMDG
VLVVGGCDKN MPGGMMGMLR ANVPAIYVYG GTILPGRWKG RDLNIVSVFE AVGENAAGKI
SDQELKDIEQ HAIPGTGSCG GMYTANTMSS AFEALGMSLP YSSTMANPHD EKENSAKESA
RVLIEAIKMD LKPRDIVTRK SIENAVSVIM ATGGSTNAVL HFLAIAHAAG VPWSIDDFER
IRQRVPVLCD LKPSGRYLAV DLHQAGGIPQ VMKILLNAGL LHGDCITISG QTIAQTLAGV
PDEPPNPQII RPLSDALYPQ GHLAILKGNL SPEGAVAKIT GLKNPVITGP ARVFDDEQSA
LAAILDGRIQ AGDVMVLRYL GPKGGPGMPE MLAPTGALIG AGLGESVGLI TDGRFSGGTW
GMVVGHVAPE AAVGGTIALV HEGDSITIDA HALRLQLNVP EDVLAQRRAA WKAPAPRYTR
GVQAKFAFNA SSASSGAVLD NFAI
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