| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3008 |
|---|
| Symbol | |
|---|
| ID | 5748592 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3310622 |
|---|
| End bp | 3312097 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298111 |
|---|
| Product | inosine-5'-monophosphate dehydrogenase |
|---|
| Protein accession | YP_001564031 |
|---|
| Protein GI | 160898449 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0516] IMP dehydrogenase/GMP reductase |
|---|
| TIGRFAM ID | [TIGR01302] inosine-5'-monophosphate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0175212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTTC TCGGTAAAGC CCTGACCTTC GACGACGTCC TCCTGGTCCC CGCTTTCTCC
CAGGTCCTGC CCAAGGACAC CTCGCTCAAG ACGCGCTTTT CGCGCAACAT CTCCCTGAAC
ATCCCCCTTG TGTCCGCCGC CATGGACACC GTGACCGAAG CGCGTCTGGC CATTGCCATT
GCGCAAGAGG GCGGTATCGG CGTCATTCAC AAGAACATGA CGGCAGAGCA ACAGGCTGCC
GAAGTGTCCA AGGTCAAGCG CCACGAATCC GGCGTGGTGC ACGACCCCGT GGTCATCACC
CCCGAGCACA CCGTGCTGCA GGTGCTGCAG CTGTCCGAGA ACCTCGGCAT CTCCGGCTTT
CCCGTGTGCG ACGGCGGCAA GGTGGTGGGC ATCGTCACCA GCCGCGACCT GCGCTTCGAG
ACCCGCTACG ACGTCAAGGT CAGCCAGATC ATGACGCCGC GCGAGCGCCT GATCACCGTC
AACGAGAAGG ACGGCACCAC GCCCGTGGAA GCCAAGGCCC TGCTCAACAA GCACAAGCTC
GAGCGCATCC TGGTCGTGAA CGACGCCTTT GAACTCAAGG GCCTTATCAC CGTCAAGGAC
ATCACCAAGC AGACCACCTT CCCCAACGCA GCGCGTGACA GCGCAGGCCG CCTGCGCGTG
GCCGCCGCCG TGAGCGTGGG CGAGGGCACC GAGCAGCGCG TGGAGCTGCT GGTCAAGGCC
GGCGTCGATG CACTGGTGGT GGACACGGCC CACGGCCACA GCAAGGGCGT GATCGACCGC
GTGCGCTGGG TCAAGCAGAA CTACCCGCAG GTCGATGTCA TCGGCGGCAA CATTGCCACC
GGCGCCGCTG CGCTGGCACT GGCCGAGGCA GGCGCCGACG CCGTCAAGGT CGGCATCGGC
CCTGGCTCCA TCTGCACCAC GCGCATCGTC GCCGGTGTGG GCGTGCCCCA GATCATGGCC
ATTGACAGCG TGGCCCAGGC CCTGCAGGGC ACGGGCGTGC CGCTGATCGC CGACGGCGGC
ATCCGCTTCT CGGGCGACAT CGCCAAGGCC CTGGCCGCTG GTGCCTCGAC CATCATGATG
GGCGGCATGT TCGCCGGCAC CGAAGAGGCT CCGGGCGAAG TCATCCTGTA CCAGGGCCGT
TCGTACAAGA GCTATCGCGG CATGGGCTCC ATCGGCGCCA TGCAGCAGGG CTCGGCCGAC
CGCTACTTCC AGGAGTCAAG CACCGGCAAC CCCAATGCCG ACAAGCTCGT GCCCGAAGGC
ATCGAAGGCC GCGTGCCCTA CAAGGGCTCC ATGGTCTCCA TCGTCTACCA GATGGCCGGC
GGCGTGCGCG CTGCCATGGG CTACTGCGGC TGCGCCACCA TCGAAGAGAT GAACAACACG
GCCGAGTTTG TGGAGATCAC CGCCGCAGGC ATCCGTGAAT CGCACGTGCA TGACGTGCAG
ATCACCAAGG AAGCGCCGAA CTACCGCGCC GACTGA
|
|---|
| Protein sequence | MRLLGKALTF DDVLLVPAFS QVLPKDTSLK TRFSRNISLN IPLVSAAMDT VTEARLAIAI
AQEGGIGVIH KNMTAEQQAA EVSKVKRHES GVVHDPVVIT PEHTVLQVLQ LSENLGISGF
PVCDGGKVVG IVTSRDLRFE TRYDVKVSQI MTPRERLITV NEKDGTTPVE AKALLNKHKL
ERILVVNDAF ELKGLITVKD ITKQTTFPNA ARDSAGRLRV AAAVSVGEGT EQRVELLVKA
GVDALVVDTA HGHSKGVIDR VRWVKQNYPQ VDVIGGNIAT GAAALALAEA GADAVKVGIG
PGSICTTRIV AGVGVPQIMA IDSVAQALQG TGVPLIADGG IRFSGDIAKA LAAGASTIMM
GGMFAGTEEA PGEVILYQGR SYKSYRGMGS IGAMQQGSAD RYFQESSTGN PNADKLVPEG
IEGRVPYKGS MVSIVYQMAG GVRAAMGYCG CATIEEMNNT AEFVEITAAG IRESHVHDVQ
ITKEAPNYRA D
|
|---|
| |