| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3002 |
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| Symbol | |
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| ID | 5748586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3307355 |
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| End bp | 3307930 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298105 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001564025 |
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| Protein GI | 160898443 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0301112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCGCA GCCAGATCCT GGAGCACCTG CCCGGCCTGC GCCGCTATGC GCGGCTGCTG
GCAGGCGATG CCTGGGCCGC CGACGACCTG GTGCAGGACA CGCTGGAGCG TGCCTGCCGC
AAATGGCTGC TGTGGCGCCC CGGCGGCGAT CTGCGCGCCT GGCTGTTCAC GCTGATGCAC
AACCTCTACT TGAACCAGCG GCGCTCTGCC GCGCGCGGGC AGTGGCTGGA CATAGACAGC
CTGTCCGAGA CCCTGGCCGC ACCCGAGGAC AGCAGCGACG CGGCCCTGGA CCTGGAGCGC
TGCCTGCAGC GCCTGCCCGC CGAGCAGCGG GCCGTGCTGC TGCTGGTCAG CGTGGAGGAC
ATGAGCTACG CCGACACGGC GCGCGTGCTG CAGCTGCCCC TGGGCACCGT GATGTCGCGC
CTGTCGCGCG CACGGTCCCG GCTGCGCGAA TTGATGGAGG CCCCATCGGC CCCATCAGCC
ACCTCGGCCT CCTCTGCAGC GCCTGCACAG TCAGCACCGA CTGCCAAGGC CGCAACACCC
CAAGCCGCAG CCCCCGCGCT GCGCCGGCTC AAATGA
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| Protein sequence | MDRSQILEHL PGLRRYARLL AGDAWAADDL VQDTLERACR KWLLWRPGGD LRAWLFTLMH
NLYLNQRRSA ARGQWLDIDS LSETLAAPED SSDAALDLER CLQRLPAEQR AVLLLVSVED
MSYADTARVL QLPLGTVMSR LSRARSRLRE LMEAPSAPSA TSASSAAPAQ SAPTAKAATP
QAAAPALRRL K
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