Gene Daci_2997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2997 
Symbol 
ID5748581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3302640 
End bp3303671 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content68% 
IMG OID641298100 
Producthypothetical protein 
Protein accessionYP_001564020 
Protein GI160898438 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0266851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC AGATCGACAA GGCGACCCGC AAAAGAGGGC GCCGCATGGC GCTGGTCACC 
CTGGCGGCCC CTATTGCGGC GGCAGCGGCG GTGGCAATGG GGGCGGCACT GCCCCGCGCC
GCGCTGGCGC AGCAGCCCTG GCCCAGCAAG CCCATCACGA TGGTCGTGCC CTTCCCGCCG
GGCGGGCCCA CCGACCTGGT GGCGCGCGTG CTGGCCCAGC AGGTCGGCCA GCAACTGGGC
CAGACCGTGA TCGTGGACAA CCGGCCCGGA GCCAATGGCA ACATCGGCAA TGCCCTGGTG
GCCAAGGCCG CGCCCGATGG CTATACCGTG CTCTACAACA CCTCGTCCAT TGCGCTGAGC
CCGTCGCTGT ACAAGAAGAT GAGCTACGAC GTGGGCAAGG ACCTGATGCC CGTGGCGCTG
ACGGCCGTGG TGCCGCTGGG CCTGGTGGTC AATCCCAAGC TGTCGGTGAA GAACGTGCAG
GAGTTCGTGC GCCATGCCAG GGACAAGACC GGCCAGCTGT CCTATGGCTC GGCAGGCAAC
GGCAATGTCA CCCACCTGGC GGCCTTCCAG GTCGTGCAGC ACTACCAGAT CGAGGCCAGC
CACGTGCCCT ACAAGGGCAG CGCGCCGGCC GACGTGGATC TGGTGGCCGG GCAGATCGAC
TTCATGACGG ACACCATCAA CTCGGTCGCC CCCTTCATCA AGGAGGGGCG GCTCAAGCTG
CTGGCCGTGA GTTCCTCCAA GCGCCTGCCC AACTTCCCCG ATGCCCCCAC GCTGGCCGAA
AGCGGCATGT CCGGCTTCGA GGCCGGTGCC TGGCAGGGCG TGATGGTGCC CGCGAAGACG
CCGGCCGCCA TCATCCAGCG GCTCAACCAG GAGCTGATGC GCGCGCTCAA GGACCCGGGC
GTGGTCGAGA AGCTGCAGCT GCAGGGCGCC GAAGGCCTGG GCTCCACGCC GGAGGAATAC
GGCGCCTACA TCCGCAGCGA GATCAAGCGC TGGGCCGGCG TGGTCAAGAG CACGGGCGTC
TCTCTGGACT GA
 
Protein sequence
MDKQIDKATR KRGRRMALVT LAAPIAAAAA VAMGAALPRA ALAQQPWPSK PITMVVPFPP 
GGPTDLVARV LAQQVGQQLG QTVIVDNRPG ANGNIGNALV AKAAPDGYTV LYNTSSIALS
PSLYKKMSYD VGKDLMPVAL TAVVPLGLVV NPKLSVKNVQ EFVRHARDKT GQLSYGSAGN
GNVTHLAAFQ VVQHYQIEAS HVPYKGSAPA DVDLVAGQID FMTDTINSVA PFIKEGRLKL
LAVSSSKRLP NFPDAPTLAE SGMSGFEAGA WQGVMVPAKT PAAIIQRLNQ ELMRALKDPG
VVEKLQLQGA EGLGSTPEEY GAYIRSEIKR WAGVVKSTGV SLD