| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2995 |
|---|
| Symbol | |
|---|
| ID | 5748579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3300902 |
|---|
| End bp | 3302098 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298098 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_001564018 |
|---|
| Protein GI | 160898436 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.233271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCA CAGTGCAGGC TGCGTTGACA GGGATTCGGG TGCTGGATCT GTCCAGCGTG
GTGTTCGGGC CGCTGGCCAG CCAGGTGCTG GCCGACTATG GCGCCGAAGT CATCAAGATC
GAGCCGCCGG CCGGCGACTC CACGCGCCAT ACCGGCCCGG CCGTGGAGCC CGGCATGGCA
GCCATGTTCA TGGGCACCAA CCGCAGCAAG AAGAGCGTGG TGCTGGACCT CAAGCAGCAA
CAGTCGCGCC AGGCCCTGCA TGCGCTGCTG GCCACGGCCG ATGTGTTCAT GCACAGCATG
CGGCCGCAAA AGCTGGCTCC GCTGGGCCTG GACCCCGCAA CGCTGCGCGA GCGCTATCCG
CGCCTGGTCT ATGCAGGCCT GCATGGCTTT GGCGAAGACG GCCCCTATGC GGGCATGCCC
GCCTATGACG ATGTCATCCA GGGCATGAGC GGCCTGGCCG ACCTGATGGA ACGCCAGACG
GGCGAGGCGC GCTACCTGCC CACCATTGCG GCCGACAAGA CCTGCGCCCT GGTGGCCGCG
CATGCCGTGC TGGCGGCGCT GTTCCAGCGC GAGCGCAGCG GCCATGGCTG CTTTGTGGAA
GTGCCCATGT ACGAGACCAT GGTGGGCTTC AACCTGGTCG AGCATTTCTA CGGCATGCAC
TTCAGCCCGG CGCTCAGCGG CGCAGGCTAC CCGCGCGTGA TGGCGCCCTG GCGCAAGCCC
TACCGAACGC TGGACGGCCA CGTCTGCATG ATGCCGTACA CCGATGCGCA CTGGCAGCGC
TTCTTCGCCG CCGTGGGCCA GCCGCAGCTG GCCCTGGATG CGCGCTTTGC CAGCCAGGCC
AGCCGCACGG CCCACATCGC CGAGCTGCTG GAGACCGCGG GCGAGCATGT GGCCCTGCAC
GGCACCCAGC ACTGGCTCGA TACCTGCCAG CGCCTGGAGA TTCCCGCCGC CCCCGTGGCG
CGCATGGACG ATCTGCCCGC CGATCCGCAC CTGCAGGCCA CGGAGTTCTT CGTGCCGCTG
CAGGACGCCG CCATGGGCAC CGTGCACCTG CCGCGTTCTT CCGTGCGCAT GGATGGCCGG
CAGGCCCCCA TGGGCATGCC ACCGCGCCTG GGCGAGCACA CGGCGGCGCT GCTGGCCCAG
GCGGGCTGGA GCGCCGAGCG CATCGCCGGC CTGCAGATCA CGCAACAGGA GACATGA
|
|---|
| Protein sequence | METTVQAALT GIRVLDLSSV VFGPLASQVL ADYGAEVIKI EPPAGDSTRH TGPAVEPGMA
AMFMGTNRSK KSVVLDLKQQ QSRQALHALL ATADVFMHSM RPQKLAPLGL DPATLRERYP
RLVYAGLHGF GEDGPYAGMP AYDDVIQGMS GLADLMERQT GEARYLPTIA ADKTCALVAA
HAVLAALFQR ERSGHGCFVE VPMYETMVGF NLVEHFYGMH FSPALSGAGY PRVMAPWRKP
YRTLDGHVCM MPYTDAHWQR FFAAVGQPQL ALDARFASQA SRTAHIAELL ETAGEHVALH
GTQHWLDTCQ RLEIPAAPVA RMDDLPADPH LQATEFFVPL QDAAMGTVHL PRSSVRMDGR
QAPMGMPPRL GEHTAALLAQ AGWSAERIAG LQITQQET
|
|---|
| |