| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2981 |
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| Symbol | |
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| ID | 5748565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3283715 |
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| End bp | 3286324 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641298084 |
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| Product | integrase family protein |
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| Protein accession | YP_001564004 |
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| Protein GI | 160898422 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.37421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AGAAAACAAC GACTACGGCC AAGTCATCTA CCGCCCCGGC TCCCAAGGTC
AAAAGGGTCT CGCGTAAAAG CGACATCACC CTGCGCTGGG TCGAACTGGA GCATCCACAA
CTCGAGGCCT GGCGCGTATT GGCAGTGGAG TGGCTCCAAG GGGAAACGAG CGGGGTTGGG
TGGAGGCTTA ATGCCTTGGC GGCCTTCTTC GAACGCTACC TCGTCCAGCA GGGGCTGCCG
CTTGACCCCT CGGTGTTCCT GGCCCGCAGC ACGGTCCTGC CGGACTTCTA CCGCACGACC
TGCCCGGATT CAGCGAATGG CATCCAGTAC AACAATAACA TCCACGCCTT CCTGCACTTC
GTGCTGCTGC GGGAGTTCAG CGAAGCCGAC GACAATGGCC AACCGGTGGT CTCACCAGCC
TTCCGCAACC CTGTGCTCCG GATGTCCAAG AGTGGCCTGC CCAGGCGGGA TGAGAGCGTC
CACTCGCCAC TGCCCTATGG GTACATTGAC GAGTTGCGGC AAATGCTGGC AGCAGGCCCA
AACTTCTGCG ACTGGCCGTG GGCGCAGAGC GCTCTGGGTG TGGAAATTGG CCAGCGCGGG
CAAGGTGCAC CTGATTGGTT TGAAGTGACC GAGGGCCAGA TTGACCGGAA CGACCCCGAC
TGCGTGTGGC GAGTCCGCAA GGTGAGTCCG AAATATCGCG GTGGCCAGGT GCTGGAGATG
TGGAGCCCGG TGCGTTGGGT TGCCCTGCTC GTGAAGCTCA TCCTGCCGCT GCGAACCTTC
CAGGTGCGCA TGCTCGACTC GGGCGAAGCG GATACCTGGC GCTATTCAGC GGGTGAGTGG
ACTTTGAATA CGAACCGACT TGCACGGGGC AGCGAACGAC GCCCCCTCCA GCAAGGGGTG
TTTCGCCGCA GCAACCCGCT CTCCGATGGT AAAGATGCAT CAACCGTGCT TCACATCAAC
ACCAACAAGA CTGCGGACAT CGCCAAATCC GGTACAGAGA AAGGCTACGT GTTGCCCTGG
TCCTTAGGTG GACCGGTACA TCAGGACGTC TTTTACTGGC TAGAGAAGCT GCGCAATTGG
CAGGAGAAGT ACAACCCCGT CTCACGGCGC GCAGCTTGGA CGGAACTGGA TGGCCGCCAC
ATCAAGGCGA AGAGCGAGGT GCAGCTCGCT GGCTATCCTG ACGCTTGCTT CCTCTTCAGG
TTCCCGGAGG CCCGAGACGA CGAGCGGCAT CTGGCGATGG TGGATGGTTC CATGGATAGG
GCGTGGTTCG TTCTGCTGGA AGCGCTCGAA CTGCGACTCG CCGACCTGGG TGAAACCCAC
CGTAACGGAA ACCCGATTCG CTTCCTCCCG CCGCCAGAGG AGCAGAACAA TGGGCGGACA
ACCCTCTTCC CGCTGCACAG CCTGCGCGTC TCCCTCATCA CCGCACTGGC TCTGGAAGGG
CAGGTACCGT TTCCGATACT GCAAAAACTC GTCGGCCACA GCCGGCTGCT GATGACGCTC
TACTACACCA AGCCCGGCGC AACCCACATA CGAGATGTGC TGCATGGTGC TGCGGAGCGG
CTGGAGGCGC GCAAGGAATC AAGCATCCAG AACTTCCTAC TGGATACCGC ACACGACGAA
CTGCTGCAAA AGGCCATCTG CAACAGCGTG CCCAGCCTTG CCGCTGCCAT CCCGCAGCAT
CCCGCTGCGC GCAACCCGGT AGGCTGGATG CCGATGCACC ATGGTCTGTG TCTGGTCGGT
GGCAACACGA GTGAGACTGA GGATAACGGC GTTGTGGGCG GCTGCTATAA CGGCGGGCCA
AACCTAGGCT CACCTTCCGC TCCGAAGTAC GGAGCGGTTC CGGGCGGCAG TCGCAATTGC
GTGCGTTGCC GCTGGTTCGT GACCGAACCA CACCACCTGC CTGCGCTGGC AGCCCACTTC
AACACACTGG CCTATCACTT CGACGAGGCA CGCAACGCCT GCCTTGCGCG CGAACAGGAG
CTTCAGGGCC TGAAAAAGCA GAAGGCTGAC GCGGAGGACG CTGGACATCC GTTTGCTTGC
CAGGACGCTT ACCGGCAGGC CGAGCGGGTG TGGGAAAGCG CGATGAAGCG CTTCAGCGAC
TTGGCCGAAG ACTTGGTGGC CTGCTGGCGT CTTATTGAGC GCTGCAAGGC TGCGCTGAAT
GCCGCAGAAG GCGACGGCAC GCAACTGGTC ACGGTCGGCG AGGTGGCCGA CGTGCAGGTT
GCCTTTGAGG AGACGGACTC CGAACTGCTC CAGTTGAGCG GTGTCTGCGA CAGCGTCGAG
GTCTACCCCG ACCTGGAGCC GGGAAAGGCG GTCTTCCGCC GCAGCCAACT CCTCGATGGT
GTGCTCTATC GTGACGACCT GCCACCCGTG TTCATGCTTC TGGGCGAGCA GGAGCAACTG
CTCGCGGGCA ACGCCTTCAT GCGAAGACTG GCCCAGCAGA TGAACGCTGC GAATCCCGTG
CTTGGCCAGC GGGAGGTGAT TCGCCTGATG GACGCAGGCG TACGCCTCAG CCAGCACTTC
AACATGGACC TCGCTTCGCT GCTGCACGCC GACCGCCCGG TTCAGTCGTT CCCCTCCGGC
CCCCGACCCT TGACCGGAGA CGCAGCATGA
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| Protein sequence | MTEKKTTTTA KSSTAPAPKV KRVSRKSDIT LRWVELEHPQ LEAWRVLAVE WLQGETSGVG
WRLNALAAFF ERYLVQQGLP LDPSVFLARS TVLPDFYRTT CPDSANGIQY NNNIHAFLHF
VLLREFSEAD DNGQPVVSPA FRNPVLRMSK SGLPRRDESV HSPLPYGYID ELRQMLAAGP
NFCDWPWAQS ALGVEIGQRG QGAPDWFEVT EGQIDRNDPD CVWRVRKVSP KYRGGQVLEM
WSPVRWVALL VKLILPLRTF QVRMLDSGEA DTWRYSAGEW TLNTNRLARG SERRPLQQGV
FRRSNPLSDG KDASTVLHIN TNKTADIAKS GTEKGYVLPW SLGGPVHQDV FYWLEKLRNW
QEKYNPVSRR AAWTELDGRH IKAKSEVQLA GYPDACFLFR FPEARDDERH LAMVDGSMDR
AWFVLLEALE LRLADLGETH RNGNPIRFLP PPEEQNNGRT TLFPLHSLRV SLITALALEG
QVPFPILQKL VGHSRLLMTL YYTKPGATHI RDVLHGAAER LEARKESSIQ NFLLDTAHDE
LLQKAICNSV PSLAAAIPQH PAARNPVGWM PMHHGLCLVG GNTSETEDNG VVGGCYNGGP
NLGSPSAPKY GAVPGGSRNC VRCRWFVTEP HHLPALAAHF NTLAYHFDEA RNACLAREQE
LQGLKKQKAD AEDAGHPFAC QDAYRQAERV WESAMKRFSD LAEDLVACWR LIERCKAALN
AAEGDGTQLV TVGEVADVQV AFEETDSELL QLSGVCDSVE VYPDLEPGKA VFRRSQLLDG
VLYRDDLPPV FMLLGEQEQL LAGNAFMRRL AQQMNAANPV LGQREVIRLM DAGVRLSQHF
NMDLASLLHA DRPVQSFPSG PRPLTGDAA
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