| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2976 |
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| Symbol | |
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| ID | 5748560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3278972 |
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| End bp | 3280660 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641298079 |
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| Product | ABC transporter related |
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| Protein accession | YP_001563999 |
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| Protein GI | 160898417 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4172] ABC-type uncharacterized transport system, duplicated ATPase component |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.100933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG AGCAGCCGGC AATGGAGCTG CCTTCGCCCC CCGGCCGTGG CCGGACATTG
CTGTCCGTGC GCAACCTGCG CGTGCGCTTC GGCAGCAAGG ATGTGGTGCA CGGCGTGAGC
TTCGACCTGG CGGCAGGCGA GAAGCTGGCG CTGGTGGGCG AGTCCGGCTC GGGCAAGACC
ATCACCGCGC TGTCGCTGCT GCGGCTGGCT GGAGACGCTC AGCTGGGCGG CCAGGCCCTG
TTCGACGGCC GCGACCTGCT GCGCCTGCCC GAGCGCGAGA TGCGCGCCGT GCGCGGCGGC
GACGTGGCCA TGATTTTCCA GGAGCCCATG ACGGCGCTCA ACCCGCTGAT GACCGTGGGC
GAGCAGGTGG GCGAGGTGCT TCGCCTCAAG CAGGGGCTGA CGCGAGCGCA ATCCCTGGTC
CAGGCCACCG AATTGCTGGC GACCACCGGC ATTGCCGAGC CTGTGCGCCG CGCCCGGGCC
TTTCCCCACC AGCTCAGTGG CGGGCAGCGC CAGCGCGCCA TGATCGCCAT GGCGCTGGCC
AGCAGCCCGC GCCTGCTCCT GGCCGATGAG CCGACGACGG CACTCGATGT CACGCTGCGC
GGCCAGATCC TGCAGTTGCT CGATGACCTG CAGCGCCAGG CCGGCATGGC CGTGCTGATG
ATCACGCACG ACCTGCACCT GGTGCGGCGC TTTGCCGACC GCGTGGCGGT GATGGAGCGC
GGGCAACTGG TGGAGCAGGG CGGGGTGTCG GCGGTCATGG CGGCTCCGCG CCATGCCTAT
ACGCGCAAGC TGCTGGCCAG CGTGCCGCGC CGCGACCTGA TCGAGGTGGA GGCAGGCGCC
CAGGCCACGG CTGGCGAGCC GCTGGTGCAG GCACAGGGCC TCAAGGTCAG CTATCCGGTG
CCGCTGGCAG GCATGCGCGG ATGGTTCGGC CAGGGGCGCT TCGTCGCCGT GCAGTCCGCA
GACCTGGCGC TGTTGCCCGG GCGCACCTTG GGTGTGGTCG GTGAATCGGG ATCGGGCAAA
TCCACGCTGG CGCAGGCCGT GCTGGGGCTG CTGCCCCATG AAGGCCGGCT GCGCATTGCC
GGCCATGCCT GGCAGCAGCC AGCCACGCGC AACTCGCCCG CCAACCGTGC GCTGCGGCGC
AAGGTGCAGG TGGTGTTCCA GGACCCGTAT TCATCGCTGT CGCCCCGGCT GACGCTGGAG
CAGATCGTTG GCGAGGGCCT GCGCGTGCAT GCGCCGTCGC TGACGGCGCC GCAGCAACGC
GACCGCATCG TGGAGATGCT GTCGGCCGTG GGCCTGACGC AGGAACAGTT TCCCGGCCTG
CTTGACCGCT ATCCCCACGA ATTCTCGGGA GGCCAGCGCC AGCGCATCGC CATTGCACGC
GCCCTGGTGC TGGAGCCCGA GGTGCTGGTG CTCGACGAGC CCACCAGCGC GCTGGATGTG
ACCATTCAGC AGCAGGTGCT GGGCCTGCTG CAGCGGCTTC AGCGCGAGCG GGGCCTGGCC
TATCTGCTGA TCACGCATGA TGTGGACGTG ATCCGCGCCA TGGCCCATGA CGTGGTGGTC
ATGAAGGATG GCGCCATCGT CGAATCCGGC CCCGTCGCCC AGGTGCTGGG CGCGCCGCGC
CAGGCGTACA CGCAGCGGCT GGTGGAGGCC GCCGGCTTCT CGGGCGACGG CATGCCCGAG
GGGTTCTGA
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| Protein sequence | MNAEQPAMEL PSPPGRGRTL LSVRNLRVRF GSKDVVHGVS FDLAAGEKLA LVGESGSGKT
ITALSLLRLA GDAQLGGQAL FDGRDLLRLP EREMRAVRGG DVAMIFQEPM TALNPLMTVG
EQVGEVLRLK QGLTRAQSLV QATELLATTG IAEPVRRARA FPHQLSGGQR QRAMIAMALA
SSPRLLLADE PTTALDVTLR GQILQLLDDL QRQAGMAVLM ITHDLHLVRR FADRVAVMER
GQLVEQGGVS AVMAAPRHAY TRKLLASVPR RDLIEVEAGA QATAGEPLVQ AQGLKVSYPV
PLAGMRGWFG QGRFVAVQSA DLALLPGRTL GVVGESGSGK STLAQAVLGL LPHEGRLRIA
GHAWQQPATR NSPANRALRR KVQVVFQDPY SSLSPRLTLE QIVGEGLRVH APSLTAPQQR
DRIVEMLSAV GLTQEQFPGL LDRYPHEFSG GQRQRIAIAR ALVLEPEVLV LDEPTSALDV
TIQQQVLGLL QRLQRERGLA YLLITHDVDV IRAMAHDVVV MKDGAIVESG PVAQVLGAPR
QAYTQRLVEA AGFSGDGMPE GF
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